RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 GRIA1P42261 906 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 PLD1Q13393 1074 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 KRT33BQ14525 404 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 RBM44Q6ZP01 1051 aaKnown RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 HPS6Q86YV9 775 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SCAMP5Q8TAC9 235 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 DRG1Q9Y295 367 aaKnown RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 C9IYK1 514 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 MFSD11O43934 449 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 LYNP07948 512 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ECHS1P30084 290 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ADARP55265 1226 aaKnown RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 GJA9P57773 515 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 CDH17Q12864 832 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 DUSP4Q13115 394 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 POLD3Q15054 466 aaPredicted RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 NEDD8Q15843 81 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 VWA5B1Q5TIE3 1220 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 DUSP16Q9BY84 665 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 FRMD8P1Q9BZ68 369 aaPredicted RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 CIPCQ9C0C6 399 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SDCBP2Q9H190 292 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ZNF395Q9H8N7 513 aaPredicted RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 EBF2Q9HAK2 575 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 EML4Q9HC35 981 aaKnown RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 MYO5AQ9Y4I1 1855 aaKnown RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 YJEFN3A6XGL0 299 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 PIGNO95427 931 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SLC2A3P11169 496 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 EPHA3P29320 983 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 GPD2P43304 727 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 OXCT1P55809 520 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 PPP1R15BQ5SWA1 713 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 OTOP3Q7RTS5 596 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 LRRC52Q8N7C0 313 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 FCRL2Q96LA5 508 aaPredicted RBP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 DEFB118Q96PH6 123 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 ZBTB18Q99592 522 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SLC17A6Q9P2U8 582 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 TCRBV7S3A2A0A539 114 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 HMOX2P30519 316 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SERPINB8P50452 374 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 PRKCZQ05513 592 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 BFSP2Q13515 415 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 PSMD5Q16401 504 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SLC5A9Q2M3M2 681 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 POM121L1PQ3SYA9 428 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 CCDC81Q6ZN84 652 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM248-201ENST00000341567 OR6K2Q8NGY2 324 aa13.72□□□□□ -0.21
TMEM248-201ENST00000341567 SMIM35A0A1B0GVV1 85 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 NR5A2O00482 541 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 ZBTB24O43167 697 aaPredicted RBP13.71□□□□□ -0.21
TMEM248-201ENST00000341567 SH3BGRLO75368 114 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
TMEM248-201ENST00000341567 LRG1P02750 347 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
TMEM248-201ENST00000341567 ME2P23368 584 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 ADRA1BP35368 520 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 CD86P42081 329 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 CRHR2Q13324 411 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 SYPL2Q5VXT5 272 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 DDHD1Q8NEL9 900 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 SPATA22Q8NHS9 363 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 SEPHS2Q99611 448 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 DDX28Q9NUL7 540 aaKnown RBP13.71□□□□□ -0.21
TMEM248-201ENST00000341567 SIX4Q9UIU6 781 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 KIAA2013Q8IYS2 634 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 PCDH19Q8TAB3 1148 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 ZNF398Q8TD17 642 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 LHX5Q9H2C1 402 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 CASS4Q9NQ75 786 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 SYBUQ9NX95 663 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 CRLS1Q9UJA2 301 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 DSEQ9UL01 958 aa13.71□□□□□ -0.21
TMEM248-201ENST00000341567 TNFAIP8O95379 198 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 GUCA1CO95843 209 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 NR2C2P49116 596 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 CHN2P52757 468 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 NET1Q7Z628 596 aaPredicted RBP13.71□□□□□ -0.22
TMEM248-201ENST00000341567 UNC5BQ8IZJ1 945 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 CEP19Q96LK0 163 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 WDR55Q9H6Y2 383 aaPredicted RBP13.71□□□□□ -0.22
TMEM248-201ENST00000341567 TLR8Q9NR97 1041 aaKnown RBP13.71□□□□□ -0.22
TMEM248-201ENST00000341567 ZNF112Q9UJU3 913 aa13.71□□□□□ -0.22
TMEM248-201ENST00000341567 TIMM44O43615 452 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms