RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SULT2A1Q06520 285 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 NNTQ13423 1086 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 SLC12A1Q13621 1099 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 ZCWPW2Q504Y3 356 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 PTAR1Q7Z6K3 402 aaPredicted RBP16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 ERCC4Q92889 916 aaPredicted RBP16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 GRAMD1AQ96CP6 724 aa16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 ZFC3H1O60293 1989 aaKnown RBP16.8■□□□□ 0.28
NECTIN1-202ENST00000340882 M0QYV0 167 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 MUSKO15146 869 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 ALOX15BO15296 676 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 SPINT1O43278 529 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 MT-CO1P00395 513 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 CSF2P04141 144 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 NME1P15531 152 aaKnown RBP16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 BRD2P25440 801 aaKnown RBP16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 SLC5A2P31639 672 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 ME1P48163 572 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 VASPP50552 380 aaPredicted RBP16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 CENPCQ03188 943 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 LRMPQ12912 555 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 TMEM259Q4ZIN3 620 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 NEK5Q6P3R8 708 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 USP53Q70EK8 1073 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 SGF29Q96ES7 293 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 FEM1AQ9BSK4 669 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 OR51B4Q9Y5P0 310 aa16.79■□□□□ 0.28
NECTIN1-202ENST00000340882 CCDC187A0A096LP49 1063 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 SPTY2D1-AS1A0A0U1RR47 76 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 A6NNZ2 444 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 K7ERQ8 282 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 KPNA3O00505 521 aaPredicted RBP16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 PCDH8O95206 1070 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 AFPP02771 609 aaKnown RBP16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 ITGA2BP08514 1039 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 B3GNT8Q7Z7M8 397 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 CHST14Q8NCH0 376 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 ARHGAP9Q9BRR9 750 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 TCEAL2Q9H3H9 227 aaPredicted RBP16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 EVA1BQ9NVM1 165 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 SALL4Q9UJQ4 1053 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 SLC25A13Q9UJS0 675 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 PNMA8BQ9ULN7 279 aaPredicted RBP16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 COQ4Q9Y3A0 265 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 CSNK1G3Q9Y6M4 447 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 NBASA2RRP1 2371 aa16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 USP9XQ93008 2570 aaPredicted RBP16.78■□□□□ 0.28
NECTIN1-202ENST00000340882 F5H5T6 163 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 AQP9O43315 295 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 GCATO75600 419 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 TCEA3O75764 348 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 FBXO21O94952 628 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 GJB6O95452 261 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 IGLV3-25P01717 112 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 APOEP02649 317 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 SRCP12931 536 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 HGFP14210 728 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 WT1P19544 449 aaPredicted RBP16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 RPL13P26373 211 aaKnown RBP16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 CHRNA3P32297 505 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 NUCB2P80303 420 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 TLE1Q04724 770 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 EIF2B5Q13144 721 aaKnown RBP16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 EIF4EBP2Q13542 120 aaPredicted RBP16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 NR0B2Q15466 257 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 CNGA2Q16280 664 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 FBXL22Q6P050 247 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 TMEM270Q6UE05 265 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 SLC35F3Q8IY50 421 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 RBFAQ8N0V3 343 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 OR2A12Q8NGT7 310 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 LMX1AQ8TE12 382 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 KAT5Q92993 513 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 FAM149B1Q96BN6 582 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 BTN2A3PQ96KV6 586 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 HSFY1Q96LI6 401 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 BOCQ9BWV1 1114 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 KIAA1257Q9ULG3 409 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 HS3ST3A1Q9Y663 406 aa16.77■□□□□ 0.28
NECTIN1-202ENST00000340882 UNC13CQ8NB66 2214 aa16.77■□□□□ 0.27
NECTIN1-202ENST00000340882 USP9YO00507 2555 aaPredicted RBP16.77■□□□□ 0.27
NECTIN1-202ENST00000340882 TCAF2A6NFQ2 919 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 KCNU1A8MYU2 1149 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 SMAD6O43541 496 aaKnown RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 TRUB2O95900 331 aaKnown RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 PAK4O96013 591 aaPredicted RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 NTRK1P04629 796 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 ITGB2P05107 769 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 JUNDP17535 347 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 GGCXP38435 758 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 MLLT3P42568 568 aaPredicted RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 CYP4F2P78329 520 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 C1orf61Q13536 156 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 UBAP2LQ14157 1087 aaKnown RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 TBR1Q16650 682 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 KYAT3Q6YP21 454 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms