RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TBX18O95935 607 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 ITGB3P05106 788 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 RPLP0P05388 317 aaKnown RBP11.58□□□□□ -0.56
ATXN3-201ENST00000340660 SSTR2P30874 369 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 CSTF2P33240 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
ATXN3-201ENST00000340660 ADAM9Q13443 819 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 SV2CQ496J9 727 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 MIIPQ5JXC2 388 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 MMAAQ8IVH4 418 aaKnown RBP11.58□□□□□ -0.56
ATXN3-201ENST00000340660 UNC5BQ8IZJ1 945 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 PDZD8Q8NEN9 1154 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 OVCA2Q8WZ82 227 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 STARD8Q92502 1023 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 NDRG1Q92597 394 aaKnown RBP11.58□□□□□ -0.56
ATXN3-201ENST00000340660 FAM13BQ9NYF5 915 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 LSM7Q9UK45 103 aaKnown RBP11.58□□□□□ -0.56
ATXN3-201ENST00000340660 PLA2G4CQ9UP65 541 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 TRIM33Q9UPN9 1127 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 ARHGEF35A5YM69 484 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 GABRDO14764 452 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 AQP9O43315 295 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 MED24O75448 989 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 ZDHHC11BP0C7U3 371 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 GCFC2P16383 781 aaKnown RBP11.57□□□□□ -0.56
ATXN3-201ENST00000340660 GOT1P17174 413 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 YWHAQP27348 245 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 SLC8A1P32418 973 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 COPB1P53618 953 aaKnown RBP11.57□□□□□ -0.56
ATXN3-201ENST00000340660 C16orf72Q14CZ0 275 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 TMEM198Q66K66 360 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 SND1Q7KZF4 910 aaKnown RBP eCLIP11.57□□□□□ -0.56
ATXN3-201ENST00000340660 CATSPER3Q86XQ3 398 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 BLIDQ8IZY5 108 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 CCDC74AQ96AQ1 378 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 MEGF10Q96KG7 1140 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 SRRTQ9BXP5 876 aaKnown RBP11.57□□□□□ -0.56
ATXN3-201ENST00000340660 CPEB1Q9BZB8 566 aaKnown RBP11.57□□□□□ -0.56
ATXN3-201ENST00000340660 NACA2Q9H009 215 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 RBSNQ9H1K0 784 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.57□□□□□ -0.56
ATXN3-201ENST00000340660 DPP3Q9NY33 737 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 STIM2Q9P246 746 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 COPG2Q9UBF2 871 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 CROTQ9UKG9 612 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 PADI4Q9UM07 663 aa11.57□□□□□ -0.56
ATXN3-201ENST00000340660 TPP1O14773 563 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 DNAJB5O75953 348 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 NME1P15531 152 aaKnown RBP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 TCN2P20062 427 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 NUDT1P36639 197 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 MATR3P43243 847 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 PER3P56645 1201 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 CYP27A1Q02318 531 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 ART3Q13508 389 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 ARHGAP44Q17R89 818 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 JMJD6Q6NYC1 403 aaPredicted RBP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 ZNF438Q7Z4V0 828 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 NEK8Q86SG6 692 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 ADIPOR2Q86V24 386 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 DAW1Q8N136 415 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 NAGSQ8N159 534 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 IL12RB2Q99665 862 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 SYT15Q9BQS2 421 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 INTS2Q9H0H0 1204 aaKnown RBP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 ANO2Q9NQ90 1003 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 SUN2Q9UH99 717 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 PCDHGB6Q9Y5F9 930 aa11.56□□□□□ -0.56
ATXN3-201ENST00000340660 RBM8AQ9Y5S9 174 aaKnown RBP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 KLF2Q9Y5W3 355 aaPredicted RBP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 OAS3Q9Y6K5 1087 aaKnown RBP11.56□□□□□ -0.56
ATXN3-201ENST00000340660 ANK2Q01484 3957 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 KLF18A0A0U1RQI7 1052 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SCO2A0A1W2PP80 73 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 TLR5O60602 858 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-201ENST00000340660 CSF2P04141 144 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 LMO2P25791 158 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PCSK1P29120 753 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 HLA-FP30511 346 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PSMD8P48556 350 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PMS2P54278 862 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 FOXD4Q12950 439 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PTK2BQ14289 1009 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 FZD2Q14332 565 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SETMARQ53H47 684 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SCARA3Q6AZY7 606 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 ZNF517Q6ZMY9 492 aaPredicted RBP11.55□□□□□ -0.56
ATXN3-201ENST00000340660 TRIM69Q86WT6 500 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 TMEM86AQ8N2M4 240 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SCAMP5Q8TAC9 235 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 LMX1AQ8TE12 382 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
ATXN3-201ENST00000340660 ARSGQ96EG1 525 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PCED1BQ96HM7 432 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SMR3AQ99954 134 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 LRRN3Q9H3W5 708 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 FZD3Q9NPG1 666 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms