RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SORT1Q99523 831 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 RBBP8Q99708 897 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 CHRAC1Q9NRG0 131 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.63■□□□□ 0.25
LITAF-201ENST00000339430 B4GALT3O60512 393 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 TBX10O75333 385 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 B3GAT3O94766 335 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 SERPINE1P05121 402 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 RALBP11234 206 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 ITGB8P26012 769 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 PGGT1BP53609 377 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 SCAPQ12770 1279 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 MUM1Q2TAK8 710 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 ANKRD20A4Q4UJ75 823 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 BHLHA9Q7RTU4 235 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 POU5F2Q8N7G0 328 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 PPP4R1Q8TF05 950 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 NRG4Q8WWG1 115 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 RNF34Q969K3 372 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 MIEF2Q96C03 454 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 OXCT2Q9BYC2 517 aaPredicted RBP16.62■□□□□ 0.25
LITAF-201ENST00000339430 SHCBP1LQ9BZQ2 653 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 MMADHCQ9H3L0 296 aaPredicted RBP16.62■□□□□ 0.25
LITAF-201ENST00000339430 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
LITAF-201ENST00000339430 STOML1Q9UBI4 398 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 ZCWPW2A0A1B0GU75 182 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 ARHGAP42A6NI28 874 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 HHLA1C9JL84 531 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 DDHD2O94830 711 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 LRIG2O94898 1065 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 JCHAINP01591 159 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 SRGAP2BP0DMP2 458 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 CDK18Q07002 472 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 RAB41Q5JT25 222 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 ARHGAP24Q8N264 748 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 ACVR1CQ8NER5 493 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 SHKBP1Q8TBC3 707 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 URGCPQ8TCY9 931 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 MYLPFQ96A32 169 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 GBA3Q9H227 469 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 CASS4Q9NQ75 786 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 TBC1D13Q9NVG8 400 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 NMRK1Q9NWW6 199 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
LITAF-201ENST00000339430 F8W810 466 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 CPA3P15088 417 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 BDNFP23560 247 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 SPRP35270 261 aaPredicted RBP16.61■□□□□ 0.25
LITAF-201ENST00000339430 GATMP50440 423 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 AIF1P55008 147 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 TIGD5Q53EQ6 642 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 SNX30Q5VWJ9 437 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 KCTD11Q693B1 232 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 TMEM135Q86UB9 458 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 ABI1Q8IZP0 508 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 DNAJC9Q8WXX5 260 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 ACSS2Q9NR19 701 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 IARS2Q9NSE4 1012 aaKnown RBP16.61■□□□□ 0.25
LITAF-201ENST00000339430 C20orf96Q9NUD7 363 aaPredicted RBP16.61■□□□□ 0.25
LITAF-201ENST00000339430 PLA2G4CQ9UP65 541 aa16.61■□□□□ 0.25
LITAF-201ENST00000339430 APOBEC2Q9Y235 224 aaKnown RBP16.61■□□□□ 0.25
LITAF-201ENST00000339430 TRIM43BA6NCK2 446 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 PDHA1P08559 390 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 EN2P19622 333 aaPredicted RBP16.6■□□□□ 0.25
LITAF-201ENST00000339430 SAT1P21673 171 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 SERPINB8P50452 374 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 LIMK2P53671 638 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 ABCE1P61221 599 aaKnown RBP16.6■□□□□ 0.25
LITAF-201ENST00000339430 DBN1Q16643 649 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 RWDD4Q6NW29 188 aaKnown RBP16.6■□□□□ 0.25
LITAF-201ENST00000339430 OTOP3Q7RTS5 596 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 TAC4Q86UU9 113 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 KCNMB4Q86W47 210 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 TMEM86AQ8N2M4 240 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 AGR3Q8TD06 166 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 TRIM43Q96BQ3 446 aaPredicted RBP16.6■□□□□ 0.25
LITAF-201ENST00000339430 HDAC11Q96DB2 347 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 MOCOSQ96EN8 888 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 SMARCD1Q96GM5 515 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 EPAS1Q99814 870 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 SIK2Q9H0K1 926 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 WASF2Q9Y6W5 498 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 TTC3P53804 2025 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 A0A096LPK6 155 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 NVLO15381 856 aaKnown RBP16.6■□□□□ 0.25
LITAF-201ENST00000339430 NCAM2O15394 837 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 USP1O94782 785 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 ITGB1P05556 798 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 MX2P20592 715 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 NMBRP28336 390 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 VHLP40337 213 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 IDH3AP50213 366 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 GALNT2Q10471 571 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 USP4Q13107 963 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 INSCQ1MX18 579 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 ARHGAP36Q6ZRI8 547 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 ULK2Q8IYT8 1036 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms