RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 MAGEB18Q96M61 343 aa10.28□□□□□ -0.76
ARHGEF3-202ENST00000338458 SRPK1Q96SB4 655 aaKnown RBP10.28□□□□□ -0.76
ARHGEF3-202ENST00000338458 NSRP1Q9H0G5 558 aaKnown RBP10.28□□□□□ -0.76
ARHGEF3-202ENST00000338458 IARS2Q9NSE4 1012 aaKnown RBP10.28□□□□□ -0.76
ARHGEF3-202ENST00000338458 MOCS1Q9NZB8 636 aa10.28□□□□□ -0.76
ARHGEF3-202ENST00000338458 CXXC1Q9P0U4 656 aaPredicted RBP10.28□□□□□ -0.76
ARHGEF3-202ENST00000338458 TEX28O15482 410 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 PRPF4O43172 522 aaKnown RBP eCLIP10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 BUD23O43709 281 aaKnown RBP10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 KLKB1P03952 638 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 TSHRP16473 764 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 SYN1P17600 705 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 GLDCP23378 1020 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 CORO1AP31146 461 aaKnown RBP10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 SPRED3Q2MJR0 410 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 LGSNQ5TDP6 509 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 MARC1Q5VT66 337 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 KCTD11Q693B1 232 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 NAPEPLDQ6IQ20 393 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 NECAB2Q7Z6G3 386 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 DNAJB7Q7Z6W7 309 aaPredicted RBP10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 CMC1Q7Z7K0 106 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 OR52K2Q8NGK3 314 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 C1orf74Q96LT6 269 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 VAT1Q99536 393 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 TBL1YQ9BQ87 522 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 LRRC40Q9H9A6 602 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 CAB39LQ9H9S4 337 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 PPCSQ9HAB8 311 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 NYNRINQ9P2P1 1898 aaKnown RBP10.27□□□□□ -0.76
ARHGEF3-202ENST00000338458 CHD7Q9P2D1 2997 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 MBL2P11226 248 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 HOXC13P31276 330 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 CDH17Q12864 832 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 ANKRD20A4Q4UJ75 823 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 PACS1Q6VY07 963 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 TMC7Q7Z402 723 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 ARL14EPQ8N8R7 260 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 VPS11Q9H270 941 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 CASS4Q9NQ75 786 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 MRPL17Q9NRX2 175 aaKnown RBP10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 MYO9BQ13459 2157 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 PIRTP0C851 137 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 DSG1Q02413 1049 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 SMARCB1Q12824 385 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 VEPH1Q14D04 833 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 STRA8Q7Z7C7 330 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZNF683Q8IZ20 524 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 TMEM199Q8N511 208 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 PTPRN2Q92932 1015 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZNF689Q96CS4 500 aaPredicted RBP10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 TMEM106CQ9BVX2 250 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 BACE2Q9Y5Z0 518 aa10.27□□□□□ -0.77
ARHGEF3-202ENST00000338458 TPP1O14773 563 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ACSL4O60488 711 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 RFPL1O75677 317 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 SLC4A1P02730 911 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 PRKCGP05129 697 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 BGNP21810 368 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 WNT3AP56704 352 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 CYP4F8P98187 520 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 MGAT5Q09328 741 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 DLG2Q15700 870 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 TIGD7Q6NT04 549 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 SPRED2Q7Z698 418 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 C2orf15Q8WU43 125 aaKnown RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 NSMCE1Q8WV22 266 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 DPF3Q92784 378 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 APOPT1Q96IL0 206 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 TSGA13Q96PP4 275 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 IL12RB2Q99665 862 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 UNKQ9C0B0 810 aaKnown RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 TMEM248Q9NWD8 314 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 FETUBQ9UGM5 382 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 PHTF1Q9UMS5 762 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 GREB1Q4ZG55 1949 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 FGF18O76093 207 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 VAPBO95292 243 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZDHHC11BP0C7U3 371 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 NIPAL4Q0D2K0 466 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 CGB2Q6NT52 195 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ESRP1Q6NXG1 681 aaKnown RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZNF75CPQ92670 426 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 BADQ92934 168 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ZNF334Q9HCZ1 680 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 AAR2Q9Y312 384 aaKnown RBP10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 C5orf42Q9H799 3197 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 SNX3O60493 162 aa10.26□□□□□ -0.77
ARHGEF3-202ENST00000338458 ANXA9O76027 345 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms