RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MPP5Q8N3R9 675 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 SCAMP5Q8TAC9 235 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF473Q8WTR7 871 aaKnown RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 HSPH1Q92598 858 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 PAFAH2Q99487 392 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 MAK16Q9BXY0 300 aaKnown RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 MAGEB5Q9BZ81 275 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ZDHHC7Q9NXF8 308 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 GMIPQ9P107 970 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 YIPF1Q9Y548 306 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 FAM47DPA6NHR8 397 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ACSL4O60488 711 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 EDF1O60869 148 aaKnown RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ANXA9O76027 345 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 STC2O76061 302 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 CAPNS1P04632 268 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 CTSHP09668 335 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 SBK3P0C264 359 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 SLC6A4P31645 630 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 SSTR3P32745 418 aaPredicted RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ELK3P41970 407 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 COPAP53621 1224 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 GEMP55040 296 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 OXCT1P55809 520 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 DMC1Q14565 340 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 AGERQ15109 404 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 TMEM240Q5SV17 173 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 PSRC1Q6PGN9 363 aaPredicted RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF557Q8N988 423 aaPredicted RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 OTUB2Q96DC9 234 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 NSMCE3Q96MG7 304 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF558Q96NG5 402 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 NUDCD1Q96RS6 583 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 MFSD1Q9H3U5 465 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 SPG21Q9NZD8 308 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ASIC3Q9UHC3 531 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 DNMT3LQ9UJW3 386 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 AGO1Q9UL18 857 aaKnown RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF148Q9UQR1 794 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 PLLPQ9Y342 182 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 TCAF1Q9Y4C2 921 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 COMMD10Q9Y6G5 202 aa5.47□□□□□ -1.53
PRPF4B-201ENST00000337659 TNRC6BQ9UPQ9 1833 aaKnown RBP5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 IGLV3-16A0A075B6K0 115 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 SNX3O60493 162 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 CLDN11O75508 207 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 MPOP05164 745 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 PLA2G5P39877 138 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 TLE2Q04725 743 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 BTKQ06187 659 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 CAMK1Q14012 370 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 KYNUQ16719 465 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 CTXN3Q4LDR2 81 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 C10orf82Q8WW14 230 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 RSAD2Q8WXG1 361 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 CHMP6Q96FZ7 201 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 PDLIM5Q96HC4 596 aaKnown RBP5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 MAELQ96JY0 434 aaKnown RBP5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 UBXN10Q96LJ8 280 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 FCRL3Q96P31 734 aaPredicted RBP5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 TUBGCP5Q96RT8 1024 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 SLC2A11Q9BYW1 496 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 CPEB1Q9BZB8 566 aaKnown RBP5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 KCNK13Q9HB14 408 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 LHX3Q9UBR4 397 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 INSL5Q9Y5Q6 135 aa5.46□□□□□ -1.53
PRPF4B-201ENST00000337659 KCNN4O15554 427 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 ADAM12O43184 909 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 SLC7A4O43246 635 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 OGNP20774 298 aaKnown RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 RPS3P23396 243 aaKnown RBP eCLIP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 CORO7P57737 925 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 TPI1P60174 286 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 MAGOHP61326 146 aaKnown RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 CDC16Q13042 620 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 SNX1Q13596 522 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 PSMD5Q16401 504 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 HSF5Q4G112 596 aaPredicted RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 HSP90B2PQ58FF3 399 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 PCID2Q5JVF3 399 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 CES4AQ5XG92 561 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 PKN3Q6P5Z2 889 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 NLRP8Q86W28 1048 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 CCDC50Q8IVM0 306 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 MCCC1Q96RQ3 725 aaPredicted RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 COL25A1Q9BXS0 654 aaPredicted RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 SMOXQ9NWM0 555 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 KLHL14Q9P2G3 628 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 SGK1O00141 431 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 EIF3FO00303 357 aaPredicted RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 COCHO43405 550 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 ALDOAP04075 364 aaKnown RBP5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 NCAM1P13591 858 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 TACR2P21452 398 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 ETFBP38117 255 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 PSMD8P48556 350 aa5.46□□□□□ -1.54
PRPF4B-201ENST00000337659 TBX4P57082 545 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms