RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 IL12RB1P42701 662 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PDK2Q15119 407 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 LSM12Q3MHD2 195 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 APOBEC3HQ6NTF7 200 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 RHBDF2Q6PJF5 856 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 OR52B2Q96RD2 323 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 EFR3BQ9Y2G0 817 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 TMED5Q9Y3A6 229 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 RAP2CQ9Y3L5 183 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 SH3PXD2BA1X283 911 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF682O95780 498 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 NR3C2P08235 984 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 SHMT1P34896 483 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ST13P50502 369 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PTPN11Q06124 597 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 AGAP9Q5VTM2 703 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ATG16L2Q8NAA4 619 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 STN1Q9H668 368 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ANKEF1Q9NU02 776 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CCRL2O00421 344 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 WBP4O75554 376 aaKnown RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 SEMA3DO95025 777 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PGAM1P18669 254 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 PSMB4P28070 264 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 HOXD13P35453 343 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CCNIQ14094 377 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CMPK2Q5EBM0 449 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ARL13AQ5H913 290 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-201ENST00000337299 GRTP1Q5TC63 336 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF410Q86VK4 478 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 OR5B17Q8NGF7 314 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 TRPC4APQ8TEL6 797 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CERS2Q96G23 380 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF518BQ9C0D4 1074 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 USP29Q9HBJ7 922 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 TRPV5Q9NQA5 729 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 HPS4Q9NQG7 708 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 CDC14AQ9UNH5 594 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 NFAT5O94916 1531 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
COL2A1-201ENST00000337299 KANSL1LA0AUZ9 987 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 GABBR2O75899 941 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 GSTT2P0CG29 244 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 GSTT2BP0CG30 244 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 ARMCX4Q5H9R4 360 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 LRRC38Q5VT99 294 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 C4orf22Q6V702 233 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 PGAM4Q8N0Y7 254 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 LRRC39Q96DD0 335 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 ZHX1-C8orf76Q96EF9 292 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 XPR1Q9UBH6 696 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 EBF1Q9UH73 591 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 NR2E3Q9Y5X4 410 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 C2P06681 752 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 CFHP08603 1231 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 INHBCP55103 352 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 RELAQ04206 551 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 DLG2Q15700 870 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 NDUFA5Q16718 116 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 PRR23BQ6ZRT6 265 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 AZIN2Q96A70 460 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 XRN1Q8IZH2 1706 aaKnown RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 HTR3EA5X5Y0 456 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 H0Y858 1186 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 TSPAN3O60637 253 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 CHRNGP07510 517 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF37AP17032 561 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 TKTP29401 623 aaKnown RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 DPYSQ14117 519 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 FAM98BQ52LJ0 330 aaKnown RBP13.43□□□□□ -0.26
COL2A1-201ENST00000337299 MCFD2Q8NI22 146 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 SLC7A14Q8TBB6 771 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 SLCO2A1Q92959 643 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 ATG4CQ96DT6 458 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 CPNE1Q99829 537 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 ELP3Q9H9T3 547 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 EHD3Q9NZN3 535 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 U3KQV3 271 aa13.43□□□□□ -0.26
COL2A1-201ENST00000337299 TBX1O43435 398 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 SNAP91O60641 907 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 TFEBP19484 476 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 KLRC2P26717 231 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 RXRGP48443 463 aa13.42□□□□□ -0.26
COL2A1-201ENST00000337299 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 CACNB2Q08289 660 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-201ENST00000337299 FRG1Q14331 258 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms