RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SETD3Q86TU7 594 aaPredicted RBP18.46■□□□□ 0.55
PKP3-201ENST00000331563 HM13Q8TCT9 377 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 COPS5Q92905 334 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 ZBTB45Q96K62 511 aaPredicted RBP18.46■□□□□ 0.55
PKP3-201ENST00000331563 EHD1Q9H4M9 534 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 ZNF302Q9NR11 478 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 CNOT11Q9UKZ1 510 aaKnown RBP18.46■□□□□ 0.55
PKP3-201ENST00000331563 USP18Q9UMW8 372 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 RABL2BQ9UNT1 228 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 N6AMT1Q9Y5N5 214 aa18.46■□□□□ 0.55
PKP3-201ENST00000331563 OTOFQ9HC10 1997 aa18.46■□□□□ 0.54
PKP3-201ENST00000331563 RCVRNP35243 200 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 HARS2P49590 506 aaKnown RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 MTX3Q5HYI7 312 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 STXBP5Q5T5C0 1151 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 TAS1R3Q7RTX0 852 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 RIOX2Q8IUF8 465 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PGAM4Q8N0Y7 254 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 OR5B17Q8NGF7 314 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 RP9Q8TA86 221 aaKnown RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 CDKL2Q92772 493 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 LRRC39Q96DD0 335 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 MARK4Q96L34 752 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 SLC29A1Q99808 456 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 UNKQ9C0B0 810 aaKnown RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 ACSS2Q9NR19 701 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 SULT1C4O75897 302 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 CRADDP78560 199 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 CTBSQ01459 385 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 ITGADQ13349 1161 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 TFDP2Q14188 446 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PTK2BQ14289 1009 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 RGS21Q2M5E4 152 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 FGD3Q5JSP0 725 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 GJC2Q5T442 439 aaPredicted RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 BSPRYQ5W0U4 402 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 FAAH2Q6GMR7 532 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 ZBTB49Q6ZSB9 765 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 WDTC1Q8N5D0 677 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 ACMSDQ8TDX5 336 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 ATXN7L3BQ96GX2 97 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PCYT2Q99447 389 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 CCDC68Q9H2F9 335 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 EFCAB1Q9HAE3 211 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PCDHA11Q9Y5I1 949 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 GRIA1P42261 906 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 DPP6P42658 865 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 CYP2A13Q16696 494 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 HSDL1Q3SXM5 330 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 SCARA3Q6AZY7 606 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 FBXO16Q8IX29 292 aaPredicted RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 TBC1D15Q8TC07 691 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PTCD2Q8WV60 388 aaKnown RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 CTRCQ99895 268 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 PORCNQ9H237 461 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 NOL11Q9H8H0 719 aaKnown RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 PIH1D1Q9NWS0 290 aaKnown RBP18.45■□□□□ 0.54
PKP3-201ENST00000331563 PCDHB12Q9Y5F1 795 aa18.45■□□□□ 0.54
PKP3-201ENST00000331563 LRRIQ4A6NIV6 560 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 MAPK10P53779 464 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 PTPN20Q4JDL3 420 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 PCYOX1LQ8NBM8 494 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 CDHR1Q96JP9 859 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 SIGLEC10Q96LC7 697 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 NPAS2Q99743 824 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 PCDHAC1Q9H158 963 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 ANKRD34BA5PLL1 514 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 NOL3O60936 208 aaKnown RBP18.44■□□□□ 0.54
PKP3-201ENST00000331563 TCEA1P23193 301 aaKnown RBP18.44■□□□□ 0.54
PKP3-201ENST00000331563 EMC2Q15006 297 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 TAZQ16635 292 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 CMASQ8NFW8 434 aaPredicted RBP18.44■□□□□ 0.54
PKP3-201ENST00000331563 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 PDGFCQ9NRA1 345 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 GNPTGQ9UJJ9 305 aa18.44■□□□□ 0.54
PKP3-201ENST00000331563 WDR27A2RRH5 827 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 H3BMQ9 156 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 FARP2O94887 1054 aaPredicted RBP18.43■□□□□ 0.54
PKP3-201ENST00000331563 VAPBO95292 243 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 CKMT2P17540 419 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 E2F2Q14209 437 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 ZBTB41Q5SVQ8 909 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 TMEM198Q66K66 360 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 DENND1BQ6P3S1 775 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 TFAP2BQ92481 460 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 NACC2Q96BF6 587 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 COG8Q96MW5 612 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 ZNF518BQ9C0D4 1074 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 HTRA2O43464 458 aaPredicted RBP18.43■□□□□ 0.54
PKP3-201ENST00000331563 DGAT1O75907 488 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 GJB1P08034 283 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 CD247P20963 164 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 GLDCP23378 1020 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 ETFBP38117 255 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 BCAR1P56945 870 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 TRAF2Q12933 501 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms