RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CES2O00748 559 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 FFAR3O14843 346 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 GPR42O15529 346 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CCDC166P0CW27 439 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CRABP2P29373 138 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 PARP6Q2NL67 630 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CNSTQ6PJW8 725 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 PPTC7Q8NI37 304 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 SPPL2AQ8TCT8 520 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 GPR20Q99678 358 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 NMRAL1Q9HBL8 299 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 PCDHA11Q9Y5I1 949 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CACNA1FO60840 1977 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 EIF2S1P05198 315 aaKnown RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 RRM2P31350 389 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 OTOP2Q7RTS6 562 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 PRCCQ92733 491 aaPredicted RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 PAPOLBQ9NRJ5 636 aaKnown RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 TMEM51Q9NW97 253 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 MON2Q7Z3U7 1717 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 A0A1W2PQH9 124 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 RPL22P35268 128 aaKnown RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 HNF4AP41235 474 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 PKNOX1P55347 436 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 TBCELQ5QJ74 424 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 SH3BP5LQ7L8J4 393 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 KRT78Q8N1N4 520 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 BAP1Q92560 729 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 KLHL5Q96PQ7 755 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ETAA1Q9NY74 926 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CACNG4Q9UBN1 327 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 NCKAP1Q9Y2A7 1128 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ADCY6O43306 1168 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 OR1D2P34982 312 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CRY2Q49AN0 593 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ABHD15Q6UXT9 468 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ZNF621Q6ZSS3 439 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ARHGAP22Q7Z5H3 698 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 TTC7BQ86TV6 843 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 FIBCD1Q8N539 461 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ANKRD52Q8NB46 1076 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 UTP15Q8TED0 518 aaKnown RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 COL26A1Q96A83 441 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 SEMA3CQ99985 751 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 BBS2Q9BXC9 721 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 SEMA6AQ9H2E6 1030 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 MFSD1Q9H3U5 465 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 RXFP1Q9HBX9 757 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 DIABLOQ9NR28 239 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD3-201ENST00000330494 DPP7Q9UHL4 492 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 TMCC3Q9ULS5 477 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 MAGEA13PA6NCF6 341 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 H0YC42 278 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 CYP2A6P11509 494 aaPredicted RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 CYP20A1Q6UW02 462 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 ELMO1Q92556 727 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 NMD3Q96D46 503 aaKnown RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 CLIP3Q96DZ5 547 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 RNF157Q96PX1 679 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 MLPHQ9BV36 600 aaPredicted RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 ZYG11BQ9C0D3 744 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 KLQ9UEF7 1012 aa10.32□□□□□ -0.76
CHD3-201ENST00000330494 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.32□□□□□ -0.76
CHD3-201ENST00000330494 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 SERPINE1P05121 402 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 CTSEP14091 401 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 SERPINA4P29622 427 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 SKIV2L2P42285 1042 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 PEX5P50542 639 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 INHBEP58166 350 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 CTBP1Q13363 440 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 PSMD5Q16401 504 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 CRY1Q16526 586 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 HDDC2Q7Z4H3 204 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 MYLK2Q9H1R3 596 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 PRDM12Q9H4Q4 367 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 FCHO1O14526 889 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 ATP5BP06576 529 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 PRKAG1P54619 331 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 SFSWAPQ12872 951 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 TRIM25Q14258 630 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 AP5B1Q2VPB7 878 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 RAET1GQ6H3X3 334 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 FOXR1Q6PIV2 292 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 LZTR1Q8N653 840 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 HIPK3Q9H422 1215 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 A0A0A0MRY4 1105 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 ZBTB14O43829 449 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 PSMC3P17980 439 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 PLA2G4EQ3MJ16 856 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 C2orf73Q8N5S3 287 aaPredicted RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 SPATA13Q96N96 652 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 CAMKK2Q96RR4 588 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 RAD54BQ9Y620 910 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 TPD52L2O43399 206 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 TRIM13O60858 407 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms