RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 CENPQQ7L2Z9 268 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF551Q7Z340 670 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 CPLX4Q7Z7G2 160 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 LINC01465Q8N7H1 131 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 C12orf76Q8N812 135 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ABHD11Q8NFV4 315 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 RFWD2Q8NHY2 731 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 RSRC1Q96IZ7 334 aaKnown RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 THAP7Q9BT49 309 aaPredicted RBP4.37□□□□□ -1.71
SMCO3-201ENST00000316048 GHITMQ9H3K2 345 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SYNPO2LQ9H987 977 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 SERTAD4Q9NUC0 356 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 ASIC5Q9NY37 505 aa4.37□□□□□ -1.71
SMCO3-201ENST00000316048 FANCIQ9NVI1 1328 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 OVOS2A0A0J9YW53 1432 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 OVOS2Q6IE36 1432 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 KAT6AQ92794 2004 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 NPIPB15A6NHN6 443 aaPredicted RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 C3orf70A6NLC5 250 aaPredicted RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 LDLRAD4O15165 306 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF500O60304 480 aaPredicted RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 TIPRLO75663 272 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 GJB3O75712 270 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 NPSP0C0P6 89 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 UBL4AP11441 157 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 MATN1P21941 496 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 RRM1P23921 792 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 DUSP1P28562 367 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 HNF1BP35680 557 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 PTPN9P43378 593 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 EEFSECP57772 596 aaKnown RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 CYP4F2P78329 520 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 NUCB1Q02818 461 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 PTP4A2Q12974 167 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 GXYLT1Q4G148 440 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 FBXO43Q4G163 708 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ARL13AQ5H913 290 aaPredicted RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 FNDC7Q5VTL7 733 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ZKSCAN2Q63HK3 967 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 SLC39A5Q6ZMH5 540 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 KIF1BPQ96EK5 621 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 SERINC2Q96SA4 455 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 HTATIP2Q9BUP3 242 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 TRIM31Q9BZY9 425 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 CIPCQ9C0C6 399 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 SLC32A1Q9H598 525 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ALKBH4Q9NXW9 302 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 POLG2Q9UHN1 485 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 FZD4Q9ULV1 537 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 TESMINQ9Y4I5 508 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 PSAT1Q9Y617 370 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 SBNO1A3KN83 1393 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 KIF24Q5T7B8 1368 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 FLT4P35916 1363 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 PER2O15055 1255 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 EXOC3O60645 756 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 TULP3O75386 442 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 TUBB4AP04350 444 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 CLEC3BP05452 202 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 DLDP09622 509 aaKnown RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ATF7P17544 494 aaPredicted RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 NDUFB7P17568 137 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 PLA2G5P39877 138 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 CDH15P55291 814 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ARHGAP8P85298 464 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 CAMK1Q14012 370 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ALDH1L2Q3SY69 923 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF766Q5HY98 468 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ABHD17BQ5VST6 288 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 BCDIN3DQ7Z5W3 292 aaKnown RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 VRK3Q8IV63 474 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 LAS2Q8IYD9 372 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 KCNH5Q8NCM2 988 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 NFKBIDQ8NI38 313 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 HAS1Q92839 578 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 NPAS1Q99742 590 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 HEMGNQ9BXL5 484 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 CHMP4BQ9H444 224 aaKnown RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 HAUS2Q9NVX0 235 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 ASNSD1Q9NWL6 643 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 SARDHQ9UL12 918 aa4.36□□□□□ -1.71
SMCO3-201ENST00000316048 REXO2Q9Y3B8 237 aaKnown RBP4.36□□□□□ -1.71
SMCO3-201ENST00000316048 FMN2Q9NZ56 1722 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ADGRL3Q9HAR2 1447 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 MAP3K19Q56UN5 1328 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 NRKQ7Z2Y5 1582 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 CLIC1O00299 241 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 QSOX1O00391 747 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 MGST3O14880 152 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ZNF20P17024 532 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 SFPQP23246 707 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMCO3-201ENST00000316048 CHMP24386 653 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 ACTN2P35609 894 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 RAD52P43351 418 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 VPS41P49754 854 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 CFHR3Q02985 330 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 BYSLQ13895 437 aaKnown RBP4.35□□□□□ -1.71
SMCO3-201ENST00000316048 IL13RA2Q14627 380 aa4.35□□□□□ -1.71
SMCO3-201ENST00000316048 PCID2Q5JVF3 399 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms