RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 HIPK1Q86Z02 1210 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 LRRC57Q8N9N7 239 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 EBF2Q9HAK2 575 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 SNTG2Q9NY99 539 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TNFSF13BQ9Y275 285 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TBC1D30Q9Y2I9 924 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 RWDD3Q9Y3V2 267 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 SSC5DA1L4H1 1573 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CLOCKO15516 846 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 KCNH1O95259 989 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 MYBPC3Q14896 1274 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 SLC4A11Q8NBS3 891 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 DNAJC19Q96DA6 116 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CERS2Q96G23 380 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 SNX6Q9UNH7 406 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 SNX9Q9Y5X1 595 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PMS1P54277 932 aaKnown RBP8.95□□□□□ -0.98
COL6A5-202ENST00000312481 ACAP2Q15057 778 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 ZFPM1Q8IX07 1006 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PCSK9Q8NBP7 692 aaKnown RBP8.95□□□□□ -0.98
COL6A5-202ENST00000312481 POPDC2Q9HBU9 364 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 LOC110117498-PIK3R3F6TDL0 507 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 GCATO75600 419 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PEPDP12955 493 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 HLA-DPA1P20036 260 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 ADRA1DP25100 572 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 RPS6P62753 249 aaKnown RBP8.95□□□□□ -0.98
COL6A5-202ENST00000312481 USP49Q70CQ1 688 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PLD6Q8N2A8 252 aaKnown RBP8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PIK3R3Q92569 461 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TLR8Q9NR97 1041 aaKnown RBP8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM59LQ9UK28 342 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 AXIN2Q9Y2T1 843 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PTPRJQ12913 1337 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM63BQ5T3F8 832 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CYS1Q717R9 158 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 IRF2BP2Q7Z5L9 587 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TIFAQ96CG3 184 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 GJB4Q9NTQ9 266 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CCDC195A0A1B0GUA6 201 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 F5H5T6 163 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CYP2D6P10635 497 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CCNHP51946 323 aaPredicted RBP8.95□□□□□ -0.98
COL6A5-202ENST00000312481 DPYSL3Q14195 570 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 ANKS6Q68DC2 871 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 PLEKHA7Q6IQ23 1121 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 GPRC5AQ8NFJ5 357 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 CDH19Q9H159 772 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 ARHGAP28Q9P2N2 729 aa8.95□□□□□ -0.98
COL6A5-202ENST00000312481 TRPM6Q9BX84 2022 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SLC22A1O15245 554 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CHST10O43529 356 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 NPHS1O60500 1241 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ASS1P00966 412 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CACNB1Q02641 598 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PDCD4Q53EL6 469 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 C9orf43Q8TAL5 461 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PRMT6Q96LA8 375 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 NINJ2Q9NZG7 142 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 RNF103O00237 685 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 EPN2O95208 641 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 GNRH1P01148 92 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TEAD4Q15561 434 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PDZK1Q5T2W1 519 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SYCE2Q6PIF2 218 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ANGPTL8Q6UXH0 198 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM26Q6ZUK4 368 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 COQ4Q9Y3A0 265 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 EML1O00423 815 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 NFIBO00712 420 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TXNP10599 105 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ETS1P14921 441 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CDH3P22223 829 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PPP3CCP48454 512 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 MPP1Q00013 466 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 GRIK2Q13002 908 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 GALNT13Q8IUC8 556 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CCDC177Q9NQR7 707 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ING3Q9NXR8 418 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 CNOT11Q9UKZ1 510 aaKnown RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SNX13Q9Y5W8 968 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PDLIM1O00151 329 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PLEKP08567 350 aaPredicted RBP8.94□□□□□ -0.98
COL6A5-202ENST00000312481 PCNAP12004 261 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ITGA4P13612 1032 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 NME5P56597 212 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TRAF3Q13114 568 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 ZFP28Q8NHY6 868 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 MYLPFQ96A32 169 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 MBOAT7Q96N66 472 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 HSD17B14Q9BPX1 270 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 COLEC11Q9BWP8 271 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 SPATA9Q9BWV2 254 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 REEP1Q9H902 201 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM260Q9NX78 707 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 GNPTGQ9UJJ9 305 aa8.94□□□□□ -0.98
COL6A5-202ENST00000312481 DGKAP23743 735 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms