RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FAM72AQ5TYM5 149 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 E4F1Q66K89 784 aaPredicted RBP27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 FAM72DQ6L9T8 149 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 LINGO4Q6UY18 593 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 NLRP14Q86W24 1093 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 FAM72BQ86X60 149 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 OR2I1PQ8NGU4 316 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 OR14C36Q8NHC7 312 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 PIP4K2CQ8TBX8 421 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 IQCDQ96DY2 449 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 KDM4CQ9H3R0 1056 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 TM9SF3Q9HD45 589 aa27.04■■□□□ 1.92
CDKN2A-201ENST00000304494 K7ERQ8 282 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 CER1O95813 267 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 GLDCP23378 1020 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 L1CAMP32004 1257 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 GRIA4P48058 902 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 CCR5P51681 352 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 PLEKHA7Q6IQ23 1121 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 TMC6Q7Z403 805 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 DOCK4Q8N1I0 1966 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 DEFB124Q8NES8 71 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 OR2A12Q8NGT7 310 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 FAM131CQ96AQ9 280 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 CEP44Q9C0F1 390 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 ADAMTS9Q9P2N4 1935 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 SARDHQ9UL12 918 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 NEU3Q9UQ49 428 aa27.03■■□□□ 1.92
CDKN2A-201ENST00000304494 A0A1W2PPC4 97 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 GJB3O75712 270 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 ZMPSTE24O75844 475 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 FTLP02792 175 aaPredicted RBP27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 PBX1P40424 430 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 RECQLP46063 649 aaPredicted RBP27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 CSNK1EP49674 416 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 SERPINH1P50454 418 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 C22orf39Q6P5X5 142 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 PIP4P1Q86T03 277 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 TRIM11Q96F44 468 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 ACE2Q9BYF1 805 aaPredicted RBP27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 MAGEH1Q9H213 219 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 DNAI1Q9UI46 699 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 FZD10Q9ULW2 581 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 HPCAL4Q9UM19 191 aa27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 BZW2Q9Y6E2 419 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-201ENST00000304494 A0A1B0GVT2 93 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 DDX3XO00571 662 aaKnown RBP eCLIP27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 GIPC1O14908 333 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 SMAD6O43541 496 aaKnown RBP27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 RTN2O75298 545 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 PRNPP04156 253 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 CHRNA3P32297 505 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 METAP1P53582 386 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 GEMIN4P57678 1058 aaKnown RBP27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 CCDC15Q0P6D6 951 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 TMIEQ8NEW7 156 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 SYN2Q92777 582 aaPredicted RBP27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 EPAS1Q99814 870 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 ORAI3Q9BRQ5 295 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 MAGEB5Q9BZ81 275 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 GAREM1Q9H706 876 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 NDFIP2Q9NV92 336 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 SLCO1B1Q9Y6L6 691 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 NUMA1Q14980 2115 aa27.01■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3DA0A087WVF3 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3IA0A087WXS9 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3EA0A087X179 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3KA0A087X1G2 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3FA6NER0 549 aaPredicted RBP27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3LB9A6J9 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 RAMP2O60895 175 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3HP0C7X1 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 SKILP12757 684 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 CD59P13987 128 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 PSMA2P25787 234 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 EPHB2P29323 1055 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 RACK1P63244 317 aaKnown RBP27■■□□□ 1.91
CDKN2A-201ENST00000304494 ARF5P84085 180 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 OGDHQ02218 1023 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 ZNF252P-AS1Q0IIN9 211 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3GQ6DHY5 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3CQ6IPX1 549 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 ADAT2Q7Z6V5 191 aaKnown RBP27■■□□□ 1.91
CDKN2A-201ENST00000304494 TBC1D3Q8IZP1 549 aaPredicted RBP27■■□□□ 1.91
CDKN2A-201ENST00000304494 PCDH20Q8N6Y1 951 aaKnown RBP27■■□□□ 1.91
CDKN2A-201ENST00000304494 ARHGEF2Q92974 986 aaKnown RBP27■■□□□ 1.91
CDKN2A-201ENST00000304494 SCINQ9Y6U3 715 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 NCOR2Q9Y618 2525 aa27■■□□□ 1.91
CDKN2A-201ENST00000304494 C10orf142B7Z368 130 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 ATMINO43313 823 aaPredicted RBP26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 PLRG1O43660 514 aaKnown RBP26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 TPM3P06753 285 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 ZNF883P0CG24 379 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 MYBL1P10243 752 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 ACVRL1P37023 503 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 BNC1Q01954 994 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 CNTN1Q12860 1018 aa26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 HNRNPDQ14103 355 aaKnown RBP26.99■■□□□ 1.91
CDKN2A-201ENST00000304494 POLD3Q15054 466 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms