RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 TUBB3Q13509 450 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 CSHL1Q14406 222 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TLR1Q15399 786 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 C6orf183Q5T699 404 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TTC39BQ5VTQ0 682 aaPredicted RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 CCDC106Q9BWC9 280 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 C3orf70A6NLC5 250 aaPredicted RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 H3BSA7 217 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 TGDSO95455 350 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 OCM2P0CE71 109 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 OCMP0CE72 109 aaPredicted RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 ITGB6P18564 788 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 PBX3P40426 434 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 MYBPC1Q00872 1141 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 FLOT2Q14254 428 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 C6orf52Q5T4I8 152 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TLK2Q86UE8 772 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 SPATA2LQ8IUW3 424 aaPredicted RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 DCBLD1Q8N8Z6 715 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 ZNF560Q96MR9 790 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 RANBP9Q96S59 729 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 SDCBP2Q9H190 292 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 CRYL1Q9Y2S2 319 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 HEMK1Q9Y5R4 338 aaPredicted RBP12.11□□□□□ -0.47
APLF-201ENST00000303795 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 APOEP02649 317 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 C1QAP02745 245 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 LPIN1Q14693 890 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 TP53INP2Q8IXH6 220 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 CCDC185Q8N715 623 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 CYP2S1Q96SQ9 504 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 HAUS8Q9BT25 410 aa12.11□□□□□ -0.47
APLF-201ENST00000303795 APOC4-APOC2K7ER74 178 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 MSCO60682 206 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 SH3BGRLO75368 114 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 APOC2P02655 101 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 FAM58BPP0C7Q3 252 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 SNRPFP62306 86 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 YWHAZP63104 245 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 DCAF4L1Q3SXM0 396 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 CERCAMQ5T4B2 595 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 TAS2R42Q7RTR8 314 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 RIOX2Q8IUF8 465 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 SPATA17Q96L03 361 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 RNF157Q96PX1 679 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 HNRNPABQ99729 332 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 TRPC7Q9HCX4 862 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 S100A14Q9HCY8 104 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 VANGL2Q9ULK5 521 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 RUVBL2Q9Y230 463 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 CXorf49A8MYA2 514 aaPredicted RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 SH3BP5O60239 455 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 TADA2AO75478 443 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 SORBS2O94875 1100 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 POLBP06746 335 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 TGFB3P10600 412 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 GFAPP14136 432 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 ARL2P36404 184 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 SCIMPQ6UWF3 145 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 IGDCC3Q8IVU1 814 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 DDHD1Q8NEL9 900 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 HTR3CQ8WXA8 447 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 ARMC7Q9H6L4 198 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 NT5MQ9NPB1 228 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 UBQLN1Q9UMX0 589 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 SHOC2Q9UQ13 582 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 AP4B1Q9Y6B7 739 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 SCN4AP35499 1836 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 S100BP04271 92 aaPredicted RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 FKBP1AP62942 108 aaKnown RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 SLC6A3Q01959 620 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 GK3PQ14409 553 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 TGFBIQ15582 683 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 CCL14Q16627 93 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 TMEM110Q86TL2 294 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 ZNF410Q86VK4 478 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 PHF13Q86YI8 300 aaPredicted RBP12.1□□□□□ -0.47
APLF-201ENST00000303795 PCYT2Q99447 389 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 TKTL2Q9H0I9 626 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 C1orf21Q9H246 121 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
APLF-201ENST00000303795 BRWD3Q6RI45 1802 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms