RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PEX1O43933 1283 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 OPHN1O60890 802 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 RALAP11233 206 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 KRT10P13645 584 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 ADCY8P40145 1251 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 ARPP19P56211 112 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 HSP90AA5PQ58FG0 334 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 DCAF6Q58WW2 860 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 CFAP157Q5JU67 520 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 DUS1LQ6P1R4 473 aaKnown RBP6.8□□□□□ -1.32
TMC1-201ENST00000297784 SATL1Q86VE3 508 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 ZBED8Q8IZ13 594 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 DCP1BQ8IZD4 617 aaKnown RBP6.8□□□□□ -1.32
TMC1-201ENST00000297784 NUP93Q8N1F7 819 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 CCDC185Q8N715 623 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 EXD1Q8NHP7 514 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 ADAM32Q8TC27 787 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 C1orf54Q8WWF1 131 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 C8orf48Q96LL4 319 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 FAM161BQ96MY7 647 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 ZNF558Q96NG5 402 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 HEMGNQ9BXL5 484 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 NMUR1Q9HB89 426 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 USP29Q9HBJ7 922 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 WDR6Q9NNW5 1121 aaKnown RBP6.8□□□□□ -1.32
TMC1-201ENST00000297784 PIGVQ9NUD9 493 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 PSMC3IPQ9P2W1 217 aaPredicted RBP6.8□□□□□ -1.32
TMC1-201ENST00000297784 R3HDM2Q9Y2K5 976 aaKnown RBP6.8□□□□□ -1.32
TMC1-201ENST00000297784 INSL6Q9Y581 213 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 DENND4CQ5VZ89 1909 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 COL6A3P12111 3177 aa6.8□□□□□ -1.32
TMC1-201ENST00000297784 GRXCR1A8MXD5 290 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 E2F6O75461 281 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 FGF18O76093 207 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 DLDP09622 509 aaKnown RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 KDELR1P24390 212 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SDC4P31431 198 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MAGEA11P43364 429 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 ACADVLP49748 655 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 PSMD7P51665 324 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MSLNQ13421 630 aaPredicted RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 CAMK1Q14012 370 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 TBCCQ15814 346 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 PSMD5Q16401 504 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 P3H1Q32P28 736 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 ANKRD20A4Q4UJ75 823 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SPOUT1Q5T280 376 aaKnown RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 BSPRYQ5W0U4 402 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 PRUNE1Q86TP1 453 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 RASSF3Q86WH2 238 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SIX6OS1Q8N1H7 587 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 EDEM1Q92611 657 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 NMD3Q96D46 503 aaKnown RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 ZFRQ96KR1 1074 aaKnown RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 C9orf72Q96LT7 481 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 TMEM120AQ9BXJ8 343 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 DNAI2Q9GZS0 605 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 S100A14Q9HCY8 104 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 DNAJC17Q9NVM6 304 aaKnown RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 FAIMQ9NVQ4 179 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 ASNSD1Q9NWL6 643 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.79□□□□□ -1.32
TMC1-201ENST00000297784 DMTF1Q9Y222 760 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 PCDHB5Q9Y5E4 795 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MYO7AQ13402 2215 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 FCHO1O14526 889 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 DAB1O75553 588 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 FBXO21O94952 628 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 IGLV3-25P01717 112 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 HNRNPCP07910 306 aaKnown RBP eCLIP6.79□□□□□ -1.32
TMC1-201ENST00000297784 HAPLN1P10915 354 aaPredicted RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 VCLP18206 1134 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 LAG3P18627 525 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 KRT15P19012 456 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 KLRC2P26717 231 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 NOS2P35228 1153 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 GJC1P36383 396 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SNX16P57768 344 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 RAB15P59190 212 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 CREB5Q02930 508 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MMRN1Q13201 1228 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SPIDRQ14159 915 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 CCNG2Q16589 344 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 NFE2Q16621 373 aaPredicted RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 IZUMO3Q5VZ72 239 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 PSRC1Q6PGN9 363 aaPredicted RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 C1orf228Q6PIY5 440 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 C3orf62Q6ZUJ4 267 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 RAPH1Q70E73 1250 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 DHDDSQ86SQ9 333 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 CROCCP3Q8IVE0 287 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MAP7D3Q8IWC1 876 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 ULK2Q8IYT8 1036 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 RCOR2Q8IZ40 523 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MARVELD2Q8N4S9 558 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 ZNF461Q8TAF7 563 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 OXNAD1Q96HP4 312 aaPredicted RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 RBM15Q96T37 977 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms