RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 RNF219Q5W0B1 726 aaPredicted RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 CXorf57Q6NSI4 855 aaKnown RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 TTI2Q6NXR4 508 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 GJB7Q6PEY0 223 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 C14orf80Q86SX3 495 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 CCDC117Q8IWD4 279 aaPredicted RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 CCAR2Q8N163 923 aaKnown RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 ZNF557Q8N988 423 aaPredicted RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 SKA1Q96BD8 255 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 ALG14Q96F25 216 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 PRMT1Q99873 361 aaKnown RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 MYOCQ99972 504 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 PRORYQ9H606 182 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 ZNF395Q9H8N7 513 aaPredicted RBP9.56□□□□□ -0.88
CNOT9-202ENST00000295701 MAN1B1Q9UKM7 699 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 RP1P56715 2156 aa9.56□□□□□ -0.88
CNOT9-202ENST00000295701 KCNU1A8MYU2 1149 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 E9PAM4 449 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 F5H5T6 163 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 TRIM38O00635 465 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 LATO43561 262 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 SIGLEC6O43699 453 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 BNIP3LO60238 219 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 BRINP1O60477 761 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 GRAP2O75791 330 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 APOEP02649 317 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 C1SP09871 688 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 MYF5P13349 255 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 ACADSBP45954 432 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 STX17P56962 302 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 TAS2R38P59533 333 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 NUCB2P80303 420 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 APBA1Q02410 837 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 CNTN1Q12860 1018 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
CNOT9-202ENST00000295701 ELAVL3Q14576 367 aaKnown RBP9.55□□□□□ -0.88
CNOT9-202ENST00000295701 DLG2Q15700 870 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 ACCSLQ4AC99 568 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 AGBL4Q5VU57 503 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 SFMBT2Q5VUG0 894 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 NAPEPLDQ6IQ20 393 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 FBXL22Q6P050 247 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 TMEM110Q86TL2 294 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 PRPF39Q86UA1 669 aaKnown RBP9.55□□□□□ -0.88
CNOT9-202ENST00000295701 DEFB106AQ8N104 65 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 SLC25A45Q8N413 288 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 WDTC1Q8N5D0 677 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 ATP6V0D2Q8N8Y2 350 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 MFSD2AQ8NA29 543 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 NELFBQ8WX92 580 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 ZNF606Q8WXB4 792 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 FAM131CQ96AQ9 280 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 NXPE2Q96DL1 559 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 BTN2A3PQ96KV6 586 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 CEP63Q96MT8 703 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
CNOT9-202ENST00000295701 INTS2Q9H0H0 1204 aaKnown RBP9.55□□□□□ -0.88
CNOT9-202ENST00000295701 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 UBE2TQ9NPD8 197 aaPredicted RBP9.55□□□□□ -0.88
CNOT9-202ENST00000295701 CNTN6Q9UQ52 1028 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 SNX10Q9Y5X0 201 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 ATMQ13315 3056 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 DOCK4Q8N1I0 1966 aa9.55□□□□□ -0.88
CNOT9-202ENST00000295701 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
CNOT9-202ENST00000295701 KALRNO60229 2985 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 FAM170AA1A519 330 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 BIN1O00499 593 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 PSMA7O14818 248 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 SLC31A1O15431 190 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 THAP12O43422 761 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 PLRG1O43660 514 aaKnown RBP9.54□□□□□ -0.88
CNOT9-202ENST00000295701 SMC2O95347 1197 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 MT-CO1P00395 513 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 CTSLP07711 333 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 PRLRP16471 622 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 CKMT2P17540 419 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 HNF1BP35680 557 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 NNMTP40261 264 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 ARRB1P49407 418 aaPredicted RBP9.54□□□□□ -0.88
CNOT9-202ENST00000295701 PLK1P53350 603 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 YWHAZP63104 245 aaKnown RBP9.54□□□□□ -0.88
CNOT9-202ENST00000295701 GCNT1Q02742 428 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 CCDC173Q0VFZ6 552 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 RTP5Q14D33 572 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 KDM7AQ6ZMT4 941 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 BEND5Q7L4P6 421 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 TRIM59Q8IWR1 403 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 OR8D1Q8WZ84 308 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 CCDC34Q96HJ3 373 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 DHTKD1Q96HY7 919 aaPredicted RBP9.54□□□□□ -0.88
CNOT9-202ENST00000295701 NOX5Q96PH1 765 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 SPAG5Q96R06 1193 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 FEM1AQ9BSK4 669 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 THAP9Q9H5L6 903 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 ERVMER34-1Q9H9K5 563 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 FZD3Q9NPG1 666 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 UCKL1Q9NWZ5 548 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 VANGL2Q9ULK5 521 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms