RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 C19orf18Q8NEA5 215 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TAS1R2Q8TE23 839 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CGRRF1Q99675 332 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 RGS18Q9NS28 235 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 LINC00854A0A1B0GVQ3 168 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 DDX3XO00571 662 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CSDE1O75534 798 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 IFNA14P01570 189 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CYBBP04839 570 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 EIF2S1P05198 315 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC2A3P11169 496 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SKIV2L2P42285 1042 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 RPL5P46777 297 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 PPP3CCP48454 512 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CHN2P52757 468 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 FBXW4P57775 412 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 LRRC39Q96DD0 335 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CPB2Q96IY4 423 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 KCTD14Q9BQ13 255 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 C1orf50Q9BV19 199 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 LRMDAQ9H2I8 198 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 DDIT4Q9NX09 232 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SPASTQ9UBP0 616 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 M0QYT0 321 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TPBGLP0DKB5 382 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TCF3P15923 654 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ADRA1DP25100 572 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SOAT1P35610 550 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CCT8P50990 548 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 OTOAQ7RTW8 1153 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 NET1Q7Z628 596 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC47A2Q86VL8 602 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TBCBQ99426 244 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TBC1D10AQ9BXI6 508 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ADAMTS10Q9H324 1103 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 CYP4F12Q9HCS2 524 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 DMAP1Q9NPF5 467 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 DYRK4Q9NR20 520 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ARMCX1Q9P291 453 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 MRASO14807 208 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 NCAM2O15394 837 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 GPR32O75388 356 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 ALDH2P05091 517 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 PTDSS1P48651 473 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 ANXA11P50995 505 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 TWF1Q12792 350 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 C2CD6Q53TS8 623 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 GLRA4Q5JXX5 417 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 ECHDC2Q86YB7 292 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 CMTR2Q8IYT2 770 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 POU5F2Q8N7G0 328 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 FAM172AQ8WUF8 416 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 FAM120BQ96EK7 910 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 PPP1R10Q96QC0 940 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC25A23Q9BV35 468 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 PRRG3Q9BZD7 231 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 KRT84Q9NSB2 600 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 MYH7BA7E2Y1 1941 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 KIAA1217Q5T5P2 1943 aa12.02□□□□□ -0.48
SYNGAP1-201ENST00000293748 PDE2AO00408 941 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 MFN2O95140 757 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 ITGB3P05106 788 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 AVPR1AP37288 418 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 NAB1Q13506 487 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 HIST2H2ACQ16777 129 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 KCTD21Q4G0X4 260 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 SPANXN2Q5MJ10 180 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 HIST2H2AA3Q6FI13 130 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 TIGD7Q6NT04 549 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 KCNK18Q7Z418 384 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 EXOC3L1Q86VI1 746 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 ARHGEF19Q8IW93 802 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 FNIP1Q8TF40 1166 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 GPAMQ9HCL2 828 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 LSM7Q9UK45 103 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 ITM2BQ9Y287 266 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 TRDMT1O14717 391 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 PEX1O43933 1283 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 NUDT17P0C025 328 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 DRD4P21917 467 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 PSMA3P25788 255 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 SSTR1P30872 391 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 TAF6P49848 677 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 NR1H2P55055 460 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 MGAT3Q09327 533 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 EPS8Q12929 822 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 NEDD8Q15843 81 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 GRTP1Q5TC63 336 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 SV2AQ7L0J3 742 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms