RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 COL1A2P08123 1366 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 BEST1O76090 585 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 RECQL4O94761 1208 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 TFEBP19484 476 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 CYP2B6P20813 491 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 NMBRP28336 390 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 DPP6P42658 865 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 GRIK4Q16099 956 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 KCTD11Q693B1 232 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 LILRA2Q8N149 483 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 NPWQ8N729 165 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 WNT8BQ93098 351 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 NT5C3BQ969T7 300 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 MPP4Q96JB8 637 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 C16orf70Q9BSU1 422 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 MCMBPQ9BTE3 642 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 GOLGA2P5Q9HBQ8 144 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 ANLNQ9NQW6 1124 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 UBP1Q9NZI7 540 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 KLK14Q9P0G3 267 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 MID2Q9UJV3 735 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 APPL1Q9UKG1 709 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 LZTS1Q9Y250 596 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 H3BRB1 525 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 CLPTM1O96005 669 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 TFAP2AP05549 437 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 APOA4P06727 396 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 NFKB1P19838 968 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 RPL5P46777 297 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 ANO4Q32M45 955 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 BNIPLQ7Z465 357 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 TMEM151AQ8N4L1 468 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 B4GALNT2Q8NHY0 566 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 C1QTNF1Q9BXJ1 281 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 GBA3Q9H227 469 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 ZNF385DQ9H6B1 395 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 TUT1Q9H6E5 874 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 WDR41Q9HAD4 459 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 NDUFA13Q9P0J0 144 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 RAB26Q9ULW5 256 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 CDYLQ9Y232 598 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 MYOCOSA0A1B0GUC4 107 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 VILLO15195 856 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 SRGAP2BP0DMP2 458 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 RABGGTBP53611 331 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 TPI1P60174 286 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 PPIDQ08752 370 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 PGAM4Q8N0Y7 254 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 CPSF7Q8N684 471 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 METTL25Q8N6Q8 603 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 KCTD4Q8WVF5 259 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 DGCR14Q96DF8 476 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 DTNBP1Q96EV8 351 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 APBA2Q99767 749 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 PKP2Q99959 881 aa13.46□□□□□ -0.25
SLC28A1-201ENST00000286749 ASB14A6NK59 587 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 I6L893 689 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 PIRO00625 290 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 ATP6V1B1P15313 513 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 ADRA1BP35368 520 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 MYBPC1Q00872 1141 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 PRKAA1Q13131 559 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 MAP7Q14244 749 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 USP10Q14694 798 aaKnown RBP13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 NADK2Q4G0N4 442 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 MAMDC4Q6UXC1 1216 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 ZNF410Q86VK4 478 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 OSTM1Q86WC4 334 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 TICAM1Q8IUC6 712 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 SULF1Q8IWU6 871 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 GALNT4Q8N4A0 578 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 B3GALNT2Q8NCR0 500 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 RDH11Q8TC12 318 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 RNF217Q8TC41 542 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 GPR22Q99680 433 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 DUSP16Q9BY84 665 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 GRIP2Q9C0E4 1043 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
SLC28A1-201ENST00000286749 LRRC4Q9HBW1 653 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms