RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 DSC1Q08554 894 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC39A12Q504Y0 691 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 RABGAP1LQ5R372 815 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 COLGALT2Q8IYK4 626 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 TRIM56Q9BRZ2 755 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 APOBEC2Q9Y235 224 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 COMMD3-BMI1R4GMX3 469 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 MEI4A8MW99 385 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 GRIA1P42261 906 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 ERFP50548 548 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 MED21Q13503 144 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 MROH9Q5TGP6 573 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 SLAIN1Q8ND83 568 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 HAPLN3Q96S86 360 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 EBNA1BP2Q99848 306 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 UNC93B1Q9H1C4 597 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 ZNF487B1APH4 448 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 FKTNO75072 461 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 UQCRBP14927 111 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 PBX3P40426 434 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 COPAP53621 1224 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 BTKQ06187 659 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 LAMB3Q13751 1172 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 FASTKD1Q53R41 847 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 MBLAC2Q68D91 279 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 ZCCHC23Q6ZST2 131 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 CDKL3Q8IVW4 592 aaPredicted RBP18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 UROC1Q96N76 676 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 QKIQ96PU8 341 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 KLHL4Q9C0H6 718 aa18.67■□□□□ 0.58
PDLIM3-201ENST00000284767 NLRC5Q86WI3 1866 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 EEF2KO00418 725 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 EOMESO95936 686 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PABPC4LP0CB38 370 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 MYL4P12829 197 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 GRIK1P39086 918 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 GPR15P49685 360 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 FAM189BP81408 668 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC25A3Q00325 362 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 GRM2Q14416 872 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 CFAP157Q5JU67 520 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 HEATR6Q6AI08 1181 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PGM2L1Q6PCE3 622 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 CYS1Q717R9 158 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 TAC4Q86UU9 113 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 THEM5Q8N1Q8 247 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PIP4K2CQ8TBX8 421 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 RNF217Q8TC41 542 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 ACMSDQ8TDX5 336 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 SIGLEC10Q96LC7 697 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PGLYRP2Q96PD5 576 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 COLEC11Q9BWP8 271 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 ABI2Q9NYB9 513 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 DSEQ9UL01 958 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PCDHA11Q9Y5I1 949 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 DGKIO75912 1065 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 ZFXP17010 805 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 TPSB2P20231 275 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 IRX4P78413 519 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 TSPY1Q01534 308 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 TPSAB1Q15661 275 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 DENND5BQ6ZUT9 1274 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 SPATA2LQ8IUW3 424 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 SCN4BQ8IWT1 228 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 ACTRT2Q8TDY3 377 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 DEPDC1BQ8WUY9 529 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PYDC1Q8WXC3 89 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PIH1D1Q9NWS0 290 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 SEPT10Q9P0V9 454 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 PCDH10Q9P2E7 1040 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 SSX2IPQ9Y2D8 614 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 DNAJC16Q9Y2G8 782 aa18.66■□□□□ 0.58
PDLIM3-201ENST00000284767 INPPL1O15357 1258 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 NR2C2P49116 596 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC5A3P53794 718 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 TRMT10BQ6PF06 316 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 CCNYQ8ND76 341 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 TFB1MQ8WVM0 346 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 ZNF778Q96MU6 729 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 TKTL2Q9H0I9 626 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 FBXW11Q9UKB1 542 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 MAD1L1Q9Y6D9 718 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 GSRP00390 522 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 SELPP16109 830 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 ERCC2P18074 760 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC1A6P48664 564 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 CCNIQ14094 377 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 DPYSQ14117 519 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 TEDDM1Q5T9Z0 273 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 PM20D1Q6GTS8 502 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 SDCCAG8Q86SQ7 713 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 HTR3CQ8WXA8 447 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 SCLYQ96I15 445 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 PRDM12Q9H4Q4 367 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 DNAJC28Q9NX36 388 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 PCDHB8Q9UN66 801 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 PHF24Q9UPV7 400 aa18.65■□□□□ 0.58
PDLIM3-201ENST00000284767 PTPRDP23468 1912 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms