RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 SCUBE2Q9NQ36 999 aa16.03■□□□□ 0.16
MSI2-201ENST00000284073 PDGFCQ9NRA1 345 aa16.03■□□□□ 0.16
MSI2-201ENST00000284073 OR6B1O95007 311 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 FDX1P10109 184 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 PABPC1P11940 636 aaKnown RBP16.02■□□□□ 0.16
MSI2-201ENST00000284073 PSMA3P25788 255 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.16
MSI2-201ENST00000284073 SLC1A5Q15758 541 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 TKFCQ3LXA3 575 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 KCNK18Q7Z418 384 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 ALLCQ8N6M5 410 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 OR8H1Q8NGG4 311 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 B3GALT6Q96L58 329 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 SLITRK1Q96PX8 696 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 BTRCQ9Y297 605 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 GAKO14976 1311 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 MYL4P12829 197 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 AQP4P55087 323 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 UNC5AQ6ZN44 842 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 ARCQ7LC44 396 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 ERVK-5Q9HDB9 667 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 ENOPH1Q9UHY7 261 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 PRPF19Q9UMS4 504 aaKnown RBP16.02■□□□□ 0.16
MSI2-201ENST00000284073 VPS4BO75351 444 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 NTRK1P04629 796 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 CCDC166P0CW27 439 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 KDELR1P24390 212 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 CDC42P60953 191 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 SDE2Q6IQ49 451 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 TAMM41Q96BW9 452 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 GPATCH1Q9BRR8 931 aaKnown RBP16.02■□□□□ 0.16
MSI2-201ENST00000284073 TPK1Q9H3S4 243 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 CDH22Q9UJ99 828 aa16.02■□□□□ 0.16
MSI2-201ENST00000284073 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 HDAC3O15379 428 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 AVILO75366 819 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 SERPINA1P01009 418 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 PRKAR1AP10644 381 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 TRIM32Q13049 653 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 TYSND1Q2T9J0 566 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 TMEM139Q8IV31 216 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 VPS35Q96QK1 796 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 RAPGEFL1Q9UHV5 662 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 LYVE1Q9Y5Y7 322 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 TP73O15350 636 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 CYP2C9P11712 490 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 VPS72Q15906 364 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 ATP6V0D2Q8N8Y2 350 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 PTTG2Q9NZH5 202 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 PRKAG3Q9UGI9 489 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 U3KQV3 271 aa16.02■□□□□ 0.15
MSI2-201ENST00000284073 E7ENX8 843 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 HNRNPLP14866 589 aaKnown RBP eCLIP16.01■□□□□ 0.151e-7■■■■■ 54.4
MSI2-201ENST00000284073 BNC1Q01954 994 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 PEX6Q13608 980 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 SCUBE3Q8IX30 993 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 OR52K1Q8NGK4 314 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 TBATAQ96M53 351 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 WDR55Q9H6Y2 383 aaPredicted RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 LSM7Q9UK45 103 aaKnown RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 CYP7B1O75881 506 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 TAL1P17542 331 aaPredicted RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 BCAT1P54687 386 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 RALGDSQ12967 914 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 SPEF1Q9Y4P9 236 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 PCDHA11Q9Y5I1 949 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 EFCAB6Q5THR3 1501 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 SF3B1O75533 1304 aaKnown RBP eCLIP16.01■□□□□ 0.159e-7■■■■■ 144
MSI2-201ENST00000284073 TISP43B9A030 160 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 DARSP14868 501 aaKnown RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 NPR3P17342 541 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 MED8Q96G25 268 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 ABCB9Q9NP78 766 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 KIAA1257Q9ULG3 409 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 FARP2O94887 1054 aaPredicted RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 CAMK2GQ13555 558 aaPredicted RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 MRPL48Q96GC5 212 aaKnown RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 PDCD10Q9BUL8 212 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 CLN6Q9NWW5 311 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 STAT5AP42229 794 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 KCTD4Q8WVF5 259 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 ACSS2Q9NR19 701 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 TSPAN16Q9UKR8 245 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 RAB26Q9ULW5 256 aa16.01■□□□□ 0.15
MSI2-201ENST00000284073 SCAF8Q9UPN6 1271 aaKnown RBP16.01■□□□□ 0.15
MSI2-201ENST00000284073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■□□□ 12.3
MSI2-201ENST00000284073 CCDC162PA2VCL2 907 aa16■□□□□ 0.15
MSI2-201ENST00000284073 TOR1BO14657 336 aa16■□□□□ 0.15
MSI2-201ENST00000284073 PTGS2P35354 604 aa16■□□□□ 0.15
MSI2-201ENST00000284073 TCF7P36402 384 aaPredicted RBP16■□□□□ 0.15
MSI2-201ENST00000284073 PRKCIP41743 596 aa16■□□□□ 0.15
MSI2-201ENST00000284073 ERICH5Q6P6B1 374 aa16■□□□□ 0.15
MSI2-201ENST00000284073 RAB43Q86YS6 212 aa16■□□□□ 0.15
MSI2-201ENST00000284073 EPS8L1Q8TE68 723 aa16■□□□□ 0.15
MSI2-201ENST00000284073 EDEM1Q92611 657 aa16■□□□□ 0.15
MSI2-201ENST00000284073 CXorf21Q9HAI6 301 aa16■□□□□ 0.15
MSI2-201ENST00000284073 TBC1D13Q9NVG8 400 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms