RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PGS1Q32NB8 556 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 AASDHQ4L235 1098 aaPredicted RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 ECHDC2Q86YB7 292 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 CLEC4FQ8N1N0 589 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 OR6K2Q8NGY2 324 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 EME1Q96AY2 570 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 EIF4E1BA6NMX2 242 aaKnown RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 LRCH4O75427 683 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 SERPINE1P05121 402 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 THRAP10827 490 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 CTPS1P17812 591 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 SLC26A9Q7LBE3 791 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 CERS2Q96G23 380 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 WDR41Q9HAD4 459 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 MORF4L1Q9UBU8 362 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 C1orf232A0A0U1RR37 186 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 MTA2O94776 668 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 PTPN3P26045 913 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 SLC1A6P48664 564 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 GET4Q7L5D6 327 aaPredicted RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 STK40Q8N2I9 435 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 CCDC3Q9BQI4 270 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 MID1IP1Q9NPA3 183 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 STX18Q9P2W9 335 aaKnown RBP13.92□□□□□ -0.18
NPC1-201ENST00000269228 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
NPC1-201ENST00000269228 ADGRA3Q8IWK6 1321 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 C1QTNF3-AMACRE9PGA6 284 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CYP1A1P04798 512 aaPredicted RBP13.91□□□□□ -0.18
NPC1-201ENST00000269228 CCL5P13501 91 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 HSPA14Q0VDF9 509 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 NAB1Q13506 487 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 GALNT3Q14435 633 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 TCEA2Q15560 299 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 TIGD5Q53EQ6 642 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 RFWD3Q6PCD5 774 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 RGL4Q8IZJ4 473 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CXorf38Q8TB03 319 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 EFCAB1Q9HAE3 211 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 COG5Q9UP83 839 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 SNAI1O95863 264 aaPredicted RBP13.91□□□□□ -0.18
NPC1-201ENST00000269228 SLC2A4P14672 509 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CDK18Q07002 472 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 ZCCHC23Q6ZST2 131 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 DET1Q7L5Y6 550 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
NPC1-201ENST00000269228 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
NPC1-201ENST00000269228 SEZ6LQ9BYH1 1024 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 PTPRHQ9HD43 1115 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 PIAS1O75925 651 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 VNN1O95497 513 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 TYMPP19971 482 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 APLP1P51693 650 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 PURAQ00577 322 aaKnown RBP13.91□□□□□ -0.18
NPC1-201ENST00000269228 PRKAA1Q13131 559 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 XRCC4Q13426 336 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 FLOT2Q14254 428 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CNGA3Q16281 694 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 LPIN3Q9BQK8 851 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 HPS4Q9NQG7 708 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 HAO1Q9UJM8 370 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 GABRQQ9UN88 632 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 ANKRD6Q9Y2G4 727 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 F8W810 466 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 NR5A2O00482 541 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 ZBTB14O43829 449 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CLDN11O75508 207 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CPSF4O95639 269 aaKnown RBP13.91□□□□□ -0.18
NPC1-201ENST00000269228 IL2P60568 153 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 CRY1Q16526 586 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 C10orf71Q711Q0 1435 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 TCF25Q9BQ70 676 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 C11orf49Q9H6J7 331 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 DTNAQ9Y4J8 743 aa13.91□□□□□ -0.18
NPC1-201ENST00000269228 TPP1O14773 563 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 TPST1O60507 370 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ADH1CP00326 375 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 HOXB8P17481 243 aaPredicted RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 WARSP23381 471 aaKnown RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 TAF5Q15542 800 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 TRIP10Q15642 601 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 INSCQ1MX18 579 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ACBD5Q5T8D3 534 aaPredicted RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 PIK3R5Q8WYR1 880 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ARL15Q9NXU5 204 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 KIAA1522Q9P206 1035 aaPredicted RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 ZNF510Q9Y2H8 683 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 BAZ2AQ9UIF9 1905 aaKnown RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 UBDO15205 165 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 PAPSS1O43252 624 aaPredicted RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 ADRA1DP25100 572 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 WNT3AP56704 352 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 RAET1GQ6H3X3 334 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 CATSPER1Q8NEC5 780 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms