RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 TTC3P53804 2025 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 MYOCOSA0A1B0GUC4 107 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 CCDC160A6NGH7 325 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 MT-CO1P00395 513 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 BRCA1P38398 1863 aaKnown RBP18.63■□□□□ 0.57
VPS37B-201ENST00000267202 GRIA4P48058 902 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 MRPS22P82650 360 aaKnown RBP18.63■□□□□ 0.57
VPS37B-201ENST00000267202 ALKAL1Q6UXT8 129 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 SDCCAG8Q86SQ7 713 aaPredicted RBP18.63■□□□□ 0.57
VPS37B-201ENST00000267202 IPMKQ8NFU5 416 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 PREBQ9HCU5 417 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 AP2A1O95782 977 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 YBX3P16989 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS37B-201ENST00000267202 SNX17Q15036 470 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 ARL13AQ5H913 290 aaPredicted RBP18.63■□□□□ 0.57
VPS37B-201ENST00000267202 TMCO4Q5TGY1 634 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 PAAF1Q9BRP4 392 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 TKTL2Q9H0I9 626 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 C1orf21Q9H246 121 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 SUDS3Q9H7L9 328 aaPredicted RBP18.63■□□□□ 0.57
VPS37B-201ENST00000267202 DNAJC28Q9NX36 388 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 PCDHGB4Q9UN71 923 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 PCDHGB5Q9Y5G0 923 aa18.63■□□□□ 0.57
VPS37B-201ENST00000267202 NEMP2A6NFY4 417 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 TRIM13O60858 407 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 FAM200BP0CF97 657 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 HARS2P49590 506 aaKnown RBP18.62■□□□□ 0.57
VPS37B-201ENST00000267202 NOMO2Q5JPE7 1267 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 FAM81AQ8TBF8 368 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 TRAPPC9Q96Q05 1148 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 CDRT15Q96T59 188 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 SPATA16Q9BXB7 569 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 ACE2Q9BYF1 805 aaPredicted RBP18.62■□□□□ 0.57
VPS37B-201ENST00000267202 KATNBL1Q9H079 304 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 ZDHHC2Q9UIJ5 367 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 CD4P01730 458 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 LSM12Q3MHD2 195 aaKnown RBP18.62■□□□□ 0.57
VPS37B-201ENST00000267202 MMEL1Q495T6 779 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 EPGNQ6UW88 154 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 RCN3Q96D15 328 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 TLK1Q9UKI8 766 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 ARHGAP26Q9UNA1 814 aa18.62■□□□□ 0.57
VPS37B-201ENST00000267202 CASTOR2A6NHX0 329 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 FKBP6O75344 327 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 CRABP2P29373 138 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 SV2CQ496J9 727 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 SATL1Q86VE3 508 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 FBXW8Q8N3Y1 598 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 NPLOC4Q8TAT6 608 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 TMA16Q96EY4 203 aaKnown RBP18.61■□□□□ 0.57
VPS37B-201ENST00000267202 SMOQ99835 787 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 CYP4F12Q9HCS2 524 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 WDR6Q9NNW5 1121 aaKnown RBP18.61■□□□□ 0.57
VPS37B-201ENST00000267202 OR12D3Q9UGF7 316 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 SLC2A6Q9UGQ3 507 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 CDY2AQ9Y6F7 541 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 CDY1Q9Y6F8 540 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 VAPBO95292 243 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 CTSHP09668 335 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 PIK3R1P27986 724 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.61■□□□□ 0.57
VPS37B-201ENST00000267202 ACTRT2Q8TDY3 377 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 KLHL4Q9C0H6 718 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 IGSF9Q9P2J2 1179 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 PLXNA1Q9UIW2 1896 aa18.61■□□□□ 0.57
VPS37B-201ENST00000267202 PMPCBO75439 489 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 MYL3P08590 195 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 PLK1P53350 603 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 SNAPC2Q13487 334 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 SEPT6Q14141 434 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 PAFAH1B3Q15102 231 aaKnown RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 DUSP28Q4G0W2 176 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 PDSS2Q86YH6 399 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 HNRNPABQ99729 332 aaKnown RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 GPAMQ9HCL2 828 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 SF3B1O75533 1304 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■■■■■ 90.5
VPS37B-201ENST00000267202 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 ZNF487B1APH4 448 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 HNRNPRO43390 633 aaKnown RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 CCNT2O60583 730 aaKnown RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 LRIG2O94898 1065 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 HNRNPLP14866 589 aaKnown RBP eCLIP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 XRCC1P18887 633 aaPredicted RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 THOP1P52888 689 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 INHBCP55103 352 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 CCDC153Q494R4 210 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 LIN52Q52LA3 116 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 UBXN11Q5T124 520 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 OLFML2BQ68BL8 750 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 GALNT4Q8N4A0 578 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 SMG8Q8ND04 991 aaKnown RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 ZSCAN18Q8TBC5 510 aaPredicted RBP18.6■□□□□ 0.57
VPS37B-201ENST00000267202 PHF12Q96QT6 1004 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 NPAS2Q99743 824 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 NAT9Q9BTE0 207 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 WDCPQ9H6R7 721 aa18.6■□□□□ 0.57
VPS37B-201ENST00000267202 EIF2B3Q9NR50 452 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms