RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 AKAP5P24588 427 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 MLH1P40692 756 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 GABRB2P47870 512 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PURAQ00577 322 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 GRTP1Q5TC63 336 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 KCNT2Q6UVM3 1135 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 MON1BQ7L1V2 547 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PLD3Q8IV08 490 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PCDH20Q8N6Y1 951 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 UROC1Q96N76 676 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 TBCBQ99426 244 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 FTHL17Q9BXU8 183 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 CEP41Q9BYV8 373 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 TMEM165Q9HC07 324 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 DNAJB4Q9UDY4 337 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 TELO2Q9Y4R8 837 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 ZNF839A8K0R7 811 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 MTSS1O43312 755 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 MPOP05164 745 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PGAM1P18669 254 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 C6orf10Q5SRN2 563 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 GIPC3Q8TF64 312 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 GTF2IRD1Q9UHL9 959 aa11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 PRPF19Q9UMS4 504 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 GNEQ9Y223 722 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-201ENST00000266546 A6NHS1 94 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 PSMD3O43242 534 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 ITGA2BP08514 1039 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 INPP1P49441 399 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 BST2Q10589 180 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 KCNA10Q16322 511 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 C1orf127Q8N9H9 656 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CD99L2Q8TCZ2 262 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 HTR3CQ8WXA8 447 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CROTQ9UKG9 612 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 PCDHGC3Q9UN70 934 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CBFA2T3O75081 653 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CST3P01034 146 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 ACAT1P24752 427 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 GRK4P32298 578 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CDKN2BP42772 138 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 KCNK10P57789 538 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CRADDP78560 199 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 LPIN1Q14693 890 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 FAM131BQ86XD5 332 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 IPMKQ8NFU5 416 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 SLC7A6OSQ96CW6 309 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 DNAJC1Q96KC8 554 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CREBZFQ9NS37 354 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 FAM105AQ9NUU6 356 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 CCDC167Q9P0B6 97 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 DAPK2Q9UIK4 370 aa11.71□□□□□ -0.53
CLSTN3-201ENST00000266546 SIN3BO75182 1162 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 VNN1O95497 513 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 ABL2P42684 1182 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 RPL14P50914 215 aaKnown RBP11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 APLP1P51693 650 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 NAGLUP54802 743 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 C15orf39Q6ZRI6 1047 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 TMC7Q7Z402 723 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 ADCY4Q8NFM4 1077 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 RCN3Q96D15 328 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 SERAC1Q96JX3 654 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 SNX27Q96L92 541 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 CPNE1Q99829 537 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 TRPC7Q9HCX4 862 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 FETUBQ9UGM5 382 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 TSPAN16Q9UKR8 245 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 EFR3BQ9Y2G0 817 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 PCDHB7Q9Y5E2 793 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 MRASO14807 208 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 FBXO21O94952 628 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 FAM163BP0C2L3 166 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 TTKP33981 857 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 NME5P56597 212 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 DAB2P98082 770 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 TRAF2Q12933 501 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 FASTKQ14296 549 aaKnown RBP11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 RALGPS1Q5JS13 557 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 DRAXINQ8NBI3 349 aaPredicted RBP11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 COLEC11Q9BWP8 271 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 MINDY3Q9H8M7 445 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 VANGL2Q9ULK5 521 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.54
CLSTN3-201ENST00000266546 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
CLSTN3-201ENST00000266546 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-201ENST00000266546 ATP6V1G1O75348 118 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms