RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 HAPLN3Q96S86 360 aa12.98□□□□□ -0.33
SGCE-201ENST00000265735 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
SGCE-201ENST00000265735 RAB6CQ9H0N0 254 aa12.98□□□□□ -0.33
SGCE-201ENST00000265735 ABCB8Q9NUT2 735 aa12.98□□□□□ -0.33
SGCE-201ENST00000265735 THAP10Q9P2Z0 257 aaPredicted RBP12.98□□□□□ -0.33
SGCE-201ENST00000265735 GGA2Q9UJY4 613 aa12.98□□□□□ -0.33
SGCE-201ENST00000265735 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
SGCE-201ENST00000265735 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 A0A1W2PQF6 199 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 HRO43593 1189 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 TJP3O95049 919 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 APBB3O95704 486 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 GAS8O95995 478 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 DESP17661 470 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 GPD1P21695 349 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 CD70P32970 193 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 ZNF143P52747 638 aaPredicted RBP12.97□□□□□ -0.33
SGCE-201ENST00000265735 HDAC4P56524 1084 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
SGCE-201ENST00000265735 E2F5Q15329 346 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 PPP1R7Q15435 360 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 CCNG2Q16589 344 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 FSCBQ5H9T9 825 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 FAM131BQ86XD5 332 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
SGCE-201ENST00000265735 UCMAQ8WVF2 138 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 C1orf54Q8WWF1 131 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
SGCE-201ENST00000265735 HEMGNQ9BXL5 484 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 TRIM31Q9BZY9 425 aa12.97□□□□□ -0.33
SGCE-201ENST00000265735 IGLV3-10A0A075B6K4 115 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 A0A1B0GVM2 712 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 TCAF2A6NFQ2 919 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 POLR3GO15318 223 aaPredicted RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 LRCH4O75427 683 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 GGCXP38435 758 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 PXNP49023 591 aaPredicted RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 FAM193AP78312 1265 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 LMAN2Q12907 356 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 TFDP3Q5H9I0 405 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 RABGAP1LQ5R372 815 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 HEATR6Q6AI08 1181 aaKnown RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 SPOCD1Q6ZMY3 1216 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 C14orf80Q86SX3 495 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 CHPFQ8IZ52 775 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 CARNMT1Q8N4J0 409 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 SUMF1Q8NBK3 374 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 TSTD1Q8NFU3 115 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 FMO2Q99518 471 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 CNPY3Q9BT09 278 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 SIK2Q9H0K1 926 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 POLMQ9NP87 494 aaPredicted RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 KIAA1522Q9P206 1035 aaPredicted RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 INTS6Q9UL03 887 aaKnown RBP12.96□□□□□ -0.33
SGCE-201ENST00000265735 VANGL2Q9ULK5 521 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
SGCE-201ENST00000265735 DRGXA6NNA5 263 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 WASH3PC4AMC7 463 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 H0Y626 953 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 SYF2O95926 243 aaKnown RBP12.96□□□□□ -0.34
SGCE-201ENST00000265735 HOXB2P14652 356 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 TCF4P15884 667 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 ADRA1BP35368 520 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 PCK1P35558 622 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 IL12RB1P42701 662 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 IRAK1P51617 712 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 NRG1Q02297 640 aaPredicted RBP12.96□□□□□ -0.34
SGCE-201ENST00000265735 SLC25A11Q02978 314 aaKnown RBP12.96□□□□□ -0.34
SGCE-201ENST00000265735 LMNB2Q03252 620 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 SNX1Q13596 522 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 CDH18Q13634 790 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 ZNF234Q14588 700 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 LLGL1Q15334 1064 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 PTPRNQ16849 979 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 CDO1Q16878 200 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 FUT11Q495W5 492 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 ATP13A4Q4VNC1 1196 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 SPDYCQ5MJ68 293 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 MBLAC2Q68D91 279 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 SDE2Q6IQ49 451 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 CXorf57Q6NSI4 855 aaKnown RBP12.96□□□□□ -0.34
SGCE-201ENST00000265735 MDGA1Q8NFP4 955 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 SORCS1Q8WY21 1168 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 RPRD1AQ96P16 312 aaPredicted RBP12.96□□□□□ -0.34
SGCE-201ENST00000265735 CIPCQ9C0C6 399 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 NEUROG2Q9H2A3 272 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 TMEM245Q9H330 911 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 KLHL11Q9NVR0 708 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 CACNA2D2Q9NY47 1150 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 MTRF1LQ9UGC7 380 aaKnown RBP12.96□□□□□ -0.34
SGCE-201ENST00000265735 EFR3BQ9Y2G0 817 aa12.96□□□□□ -0.34
SGCE-201ENST00000265735 SNX24Q9Y343 169 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms