RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FBXO44Q9H4M3 255 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 GPC4O75487 556 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 VHLP40337 213 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 HIC1Q14526 733 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 POU6F1Q14863 301 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 INSCQ1MX18 579 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 ANKRD20A4Q4UJ75 823 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 TMPRSS6Q8IU80 811 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 SLC25A41Q8N5S1 370 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 CMTM5Q96DZ9 223 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 THAP11Q96EK4 314 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 TBL1YQ9BQ87 522 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 ADCY6O43306 1168 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 ENTPD5O75356 428 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 HMBSP08397 361 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 EEF1B2P24534 225 aaKnown RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 CSE1LP55060 971 aaKnown RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 SNX30Q5VWJ9 437 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 CYP4V2Q6ZWL3 525 aaPredicted RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 DCLK2Q8N568 766 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 TRIM56Q9BRZ2 755 aaKnown RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 ILKAPQ9H0C8 392 aaPredicted RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 MTMR10Q9NXD2 777 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 KANSL3Q9P2N6 904 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 DOLKQ9UPQ8 538 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 KLF11O14901 512 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 ASGR1P07306 291 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 WASHC5Q12768 1159 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 RAET1EQ8TD07 263 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 UBE2OQ9C0C9 1292 aaKnown RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 SNX15Q9NRS6 342 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 ARL8BQ9NVJ2 186 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 RPL26L1Q9UNX3 145 aaKnown RBP16.56■□□□□ 0.24
CTCF-201ENST00000264010 SEPT4O43236 478 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 WFS1O76024 890 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 CGB2Q6NT52 195 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 TRIM67Q6ZTA4 783 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 CASP10Q92851 521 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 RNPEPL1Q9HAU8 725 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 NUDT5Q9UKK9 219 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 SNX10Q9Y5X0 201 aa16.56■□□□□ 0.24
CTCF-201ENST00000264010 MAGEA13PA6NCF6 341 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 TRIM13O60858 407 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 ADARP55265 1226 aaKnown RBP16.55■□□□□ 0.24
CTCF-201ENST00000264010 PPIDQ08752 370 aaKnown RBP16.55■□□□□ 0.24
CTCF-201ENST00000264010 ZNF235Q14590 738 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 TRIP10Q15642 601 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 CTXN3Q4LDR2 81 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 CERCAMQ5T4B2 595 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 IYDQ6PHW0 289 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 TRPV6Q9H1D0 765 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 THEGQ9P2T0 379 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 PCDHB5Q9Y5E4 795 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 AP2B1P63010 937 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 PCID2Q5JVF3 399 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 C10orf120Q5SQS8 335 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 FBXO32Q969P5 355 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 TBC1D13Q9NVG8 400 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 RUVBL2Q9Y230 463 aaKnown RBP16.55■□□□□ 0.24
CTCF-201ENST00000264010 ACOT9Q9Y305 439 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 CRCPO75575 148 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 RFPL1O75677 317 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 ABCG1P45844 678 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 TBX4P57082 545 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 EFEMP1Q12805 493 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 KRT72Q14CN4 511 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 MGAT5BQ3V5L5 792 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 KIAA1841Q6NSI8 718 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 TIFABQ6ZNK6 161 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 SERPINI1Q99574 410 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 SHCBP1LQ9BZQ2 653 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 NMRAL1Q9HBL8 299 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 GTSE1Q9NYZ3 720 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 SORCS3Q9UPU3 1222 aa16.55■□□□□ 0.24
CTCF-201ENST00000264010 GOLGA8TH3BQL2 631 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 CABYRO75952 493 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 GJA9P57773 515 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 USP46P62068 366 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 CRHR2Q13324 411 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 KCNA10Q16322 511 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 XKR4Q5GH76 650 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 SPDYAQ5MJ70 313 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 ALYREFQ86V81 257 aaKnown RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 RNF135Q8IUD6 432 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 UNC5BQ8IZJ1 945 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 FAM13CQ8NE31 585 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 TSPAN17Q96FV3 270 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 FCRL2Q96LA5 508 aaPredicted RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 SEPT5Q99719 369 aaPredicted RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 ENTPD7Q9NQZ7 604 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 UTP6Q9NYH9 597 aaKnown RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 FIS1Q9Y3D6 152 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
CTCF-201ENST00000264010 GABRDO14764 452 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 PLIN3O60664 434 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 USP1O94782 785 aa16.54■□□□□ 0.24
CTCF-201ENST00000264010 VAPBO95292 243 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms