RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ARF4P18085 180 aaPredicted RBP19.24■□□□□ 0.67
PTPRE-201ENST00000254667 TTPAP49638 278 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 TRAF2Q12933 501 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 XRCC4Q13426 336 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 RABGEF1Q9UJ41 708 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 MSRAQ9UJ68 235 aa19.24■□□□□ 0.67
PTPRE-201ENST00000254667 ANXA5P08758 320 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 NFKB1P19838 968 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 SERPINB3P29508 390 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 ZFP1Q6P2D0 407 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 NPNTQ6UXI9 565 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 LBX2Q6XYB7 198 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 FAM35AQ86V20 835 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 RICTORQ6R327 1708 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 TPP1O14773 563 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 TUSC3Q13454 348 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 UGT2B28Q9BY64 529 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 FAM124BQ9H5Z6 455 aaPredicted RBP19.23■□□□□ 0.67
PTPRE-201ENST00000254667 TBC1D3BA6NDS4 549 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 PSMD5Q16401 504 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 ARSHQ5FYA8 562 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 ZNF544Q6NX49 715 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 MREGQ8N565 214 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 CRYL1Q9Y2S2 319 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.23■□□□□ 0.67
PTPRE-201ENST00000254667 FSCN2O14926 492 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 HIRAP54198 1017 aaPredicted RBP19.23■□□□□ 0.67
PTPRE-201ENST00000254667 CRYMQ14894 314 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 SAMD4BQ5PRF9 694 aaKnown RBP19.23■□□□□ 0.67
PTPRE-201ENST00000254667 MAGEB10Q96LZ2 347 aaPredicted RBP19.23■□□□□ 0.67
PTPRE-201ENST00000254667 ZNF510Q9Y2H8 683 aa19.23■□□□□ 0.67
PTPRE-201ENST00000254667 MMP3P08254 477 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ETS1P14921 441 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ADRA1DP25100 572 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 GRK4P32298 578 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 RPS7P62081 194 aaKnown RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 C9orf57Q5W0N0 161 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 IRF2BP2Q7Z5L9 587 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 C11orf74Q86VG3 221 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ACTRT2Q8TDY3 377 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 C1QTNF3-AMACRE9PGA6 284 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 PRR23D1E9PI22 279 aaPredicted RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 CNOT3O75175 753 aaKnown RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 PRR23D2P0DMB1 279 aaPredicted RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 PABPC1P11940 636 aaKnown RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ACSM2AQ08AH3 577 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 NCF4Q15080 339 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ACSM2BQ68CK6 577 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 CXorf40AQ8TE69 158 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 LPPQ93052 612 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 PRDM12Q9H4Q4 367 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 FBXO10Q9UK96 956 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 GSTM1P09488 218 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 TCF3P15923 654 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 MRPS15P82914 257 aaKnown RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 RD3Q7Z3Z2 195 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 MON1AQ86VX9 555 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 MTMR14Q8NCE2 650 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ART4Q93070 314 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ADPRHL2Q9NX46 363 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 SNX8Q9Y5X2 465 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 SAC3D1A6NKF1 404 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 ME2P23368 584 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 CCDC142Q17RM4 750 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 TSHZ1Q6ZSZ6 1077 aa19.22■□□□□ 0.67
PTPRE-201ENST00000254667 SAE1Q9UBE0 346 aaPredicted RBP19.22■□□□□ 0.67
PTPRE-201ENST00000254667 POU1F1P28069 291 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 SOX6P35712 828 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 TRIP4Q15650 581 aaPredicted RBP19.21■□□□□ 0.67
PTPRE-201ENST00000254667 MOB2Q70IA6 237 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 PRELID2Q8N945 189 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 SH3GL3Q99963 347 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 NIFKQ9BYG3 293 aaKnown RBP19.21■□□□□ 0.67
PTPRE-201ENST00000254667 ASB8Q9H765 288 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 PIGNO95427 931 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 S100A3P33764 101 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 UBE3AQ05086 875 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 ECM1Q16610 540 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 TMEM26Q6ZUK4 368 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 NECAB2Q7Z6G3 386 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 TRAPPC5Q8IUR0 188 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 SPPL2BQ8TCT7 592 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 RNF19AQ9NV58 838 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 MRPS23Q9Y3D9 190 aaKnown RBP19.21■□□□□ 0.67
PTPRE-201ENST00000254667 TNNI3P19429 210 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 CXCR2P25025 360 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 CTNNB1P35222 781 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 EID3Q8N140 333 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 FIG4Q92562 907 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 ST6GALNAC4Q9H4F1 302 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 KLHL20Q9Y2M5 609 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 PHGDHO43175 533 aaKnown RBP19.21■□□□□ 0.67
PTPRE-201ENST00000254667 ATP5F1P24539 256 aaPredicted RBP19.21■□□□□ 0.67
PTPRE-201ENST00000254667 STRADAQ7RTN6 431 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 PTF1AQ7RTS3 328 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 DENND1CQ8IV53 801 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 C10orf88Q9H8K7 445 aa19.21■□□□□ 0.67
PTPRE-201ENST00000254667 ICAM3P32942 547 aa19.21■□□□□ 0.66
PTPRE-201ENST00000254667 NEK3P51956 506 aa19.21■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms