RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SH2D3CQ8N5H7 860 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 ATPAF2Q8N5M1 289 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 ZNF513Q8N8E2 541 aaPredicted RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 IL17RCQ8NAC3 791 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 ACTRT1Q8TDG2 376 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 MAIP1Q8WWC4 291 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 MAML1Q92585 1016 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 P3H4Q92791 437 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 ISG20Q96AZ6 181 aaKnown RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 SPON2Q9BUD6 331 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 CEP44Q9C0F1 390 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 RBM12Q9NTZ6 932 aaKnown RBP14.4□□□□□ -0.1
VPS25-201ENST00000253794 PLA2G4CQ9UP65 541 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 SIT1Q9Y3P8 196 aa14.4□□□□□ -0.1
VPS25-201ENST00000253794 CUL9Q8IWT3 2517 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 HACD1B0YJ81 288 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 J3KR12 359 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
VPS25-201ENST00000253794 SRCP12931 536 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 NTSR1P30989 418 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 CXCR5P32302 372 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
VPS25-201ENST00000253794 HNRNPA1L2Q32P51 320 aaKnown RBP14.39□□□□□ -0.11
VPS25-201ENST00000253794 EMC10Q5UCC4 262 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 TIGD7Q6NT04 549 aaPredicted RBP14.39□□□□□ -0.11
VPS25-201ENST00000253794 ARHGAP36Q6ZRI8 547 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 PLPP6Q8IY26 295 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 ACTL9Q8TC94 416 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 FRS2Q8WU20 508 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 CYB5D2Q8WUJ1 264 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 SORCS1Q8WY21 1168 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 MFSD1Q9H3U5 465 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 CD248Q9HCU0 757 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 AMACRQ9UHK6 382 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 MMP17Q9ULZ9 603 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 HEY1Q9Y5J3 304 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 SAR1BQ9Y6B6 198 aa14.39□□□□□ -0.11
VPS25-201ENST00000253794 NYNRINQ9P2P1 1898 aaKnown RBP14.39□□□□□ -0.11
VPS25-201ENST00000253794 TCRBV7S2A1N4TA0A589 114 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 ANTXRLA6NF34 631 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 MATN3O15232 486 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 CEP104O60308 925 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 ADAM23O75077 832 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 ATG13O75143 517 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 ZNF821O75541 412 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 PAPSS2O95340 614 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 MT-CO1P00395 513 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 FGGP02679 453 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 CASQ1P31415 396 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 NNMTP40261 264 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 IL12RB1P42701 662 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 STK19P49842 368 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 ST8SIA6P61647 398 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 OTUD4Q01804 1114 aaKnown RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 HNRNPDQ14103 355 aaKnown RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 GAS6Q14393 721 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 LLGL1Q15334 1064 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 DRICH1Q6PGQ1 229 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 SYT10Q6XYQ8 523 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 Q6ZS52 159 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 SPEM1Q8N4L4 309 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 TEX26Q8N6G2 289 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 NETO2Q8NC67 525 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 FLCNQ8NFG4 579 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 SLC35B2Q8TB61 432 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 COG1Q8WTW3 980 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 C16orf45Q96MC5 204 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 QKIQ96PU8 341 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS25-201ENST00000253794 ACOX2Q99424 681 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 NAP1L3Q99457 506 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 EPHX3Q9H6B9 360 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 SP110Q9HB58 689 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 SAE1Q9UBE0 346 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 RNF14Q9UBS8 474 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 UBA2Q9UBT2 640 aaPredicted RBP14.38□□□□□ -0.11
VPS25-201ENST00000253794 SLCO3A1Q9UIG8 710 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 STON1Q9Y6Q2 735 aa14.38□□□□□ -0.11
VPS25-201ENST00000253794 NUP205Q92621 2012 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 TARSL2A2RTX5 802 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 PGRMC1O00264 195 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 MTSS1O43312 755 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 SMAD6O43541 496 aaKnown RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 MAP3K6O95382 1288 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 TIE1P35590 1138 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 SEC13P55735 322 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 IFI35P80217 286 aaPredicted RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 CAMK2GQ13555 558 aaPredicted RBP14.37□□□□□ -0.11
VPS25-201ENST00000253794 C2orf27AQ580R0 203 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 SLC45A4Q5BKX6 768 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 EOGTQ5NDL2 527 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 CCDC181Q5TID7 509 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 ALG1LQ6GMV1 187 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 SERPINA13PQ6UXR4 307 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 LINGO4Q6UY18 593 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 SYT13Q7L8C5 426 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 CREG2Q8IUH2 290 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
VPS25-201ENST00000253794 CHPFQ8IZ52 775 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms