RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 GALNT8Q9NY28 637 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 TMEM98Q9Y2Y6 226 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 A0A1B0GVG6 124 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 DNALI1O14645 258 aaPredicted RBP12.54□□□□□ -0.4
SUGP1-201ENST00000247001 PAGE1O75459 146 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 TCEA3O75764 348 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 IGLV3-25P01717 112 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 SCAPQ12770 1279 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 MAP7Q14244 749 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
SUGP1-201ENST00000247001 CCDC110Q8TBZ0 833 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 SERPINB11Q96P15 392 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 RAD9AQ99638 391 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 HERC2P3Q9BVR0 1158 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 NACA2Q9H009 215 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 ZNF212Q9UDV6 495 aa12.54□□□□□ -0.4
SUGP1-201ENST00000247001 RIPK2O43353 540 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 PTPN4P29074 926 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TUFMP49411 452 aaKnown RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 AIF1P55008 147 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 GAD2Q05329 585 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 DPYSQ14117 519 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 FOXB2Q5VYV0 432 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 PHOSPHO2Q8TCD6 241 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.44e-7■■■■■ 26.8
SUGP1-201ENST00000247001 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 AFF4Q9UHB7 1163 aaKnown RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ITGB1BP2Q9UKP3 347 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 INSL6Q9Y581 213 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ZNF487B1APH4 448 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TEX28O15482 410 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 MAP3K13O43283 966 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TLR5O60602 858 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ACSL3O95573 720 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 IGFBP4P22692 258 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 PPM1AP35813 382 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TBX4P57082 545 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 PLD1Q13393 1074 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 RCN2Q14257 317 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 CCDC6Q16204 474 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ANKRD22Q5VYY1 191 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 HEATR6Q6AI08 1181 aaKnown RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 RGS9BPQ6ZS82 235 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 LONP2Q86WA8 852 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 NPWQ8N729 165 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 GDPD5Q8WTR4 605 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 FCRL2Q96LA5 508 aaPredicted RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 LRRC37BQ96QE4 947 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 TBC1D10AQ9BXI6 508 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 USP29Q9HBJ7 922 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ARHGEF38Q9NXL2 777 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 YIPF1Q9Y548 306 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
SUGP1-201ENST00000247001 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
SUGP1-201ENST00000247001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.4
SUGP1-201ENST00000247001 TCRBV7S3A2A0A539 114 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 SLC12A8A0AV02 714 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 TMEM120BA0PK00 339 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 SMIM23A6NLE4 172 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 DCLK1O15075 740 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 BANF1O75531 89 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 ABLIM3O94929 683 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 LINC00271P0C7V0 271 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 STIP1P31948 543 aaKnown RBP12.52□□□□□ -0.4
SUGP1-201ENST00000247001 NR2C2P49116 596 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 NUMBP49757 651 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 SLC34A1Q06495 639 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 TWF1Q12792 350 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 SEMA3BQ13214 749 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 CNPY1Q3B7I2 92 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 RHBDF2Q6PJF5 856 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 BEND5Q7L4P6 421 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.4
SUGP1-201ENST00000247001 BBOF1Q8ND07 529 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 ZNF398Q8TD17 642 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 TFB1MQ8WVM0 346 aaKnown RBP12.52□□□□□ -0.4
SUGP1-201ENST00000247001 TGS1Q96RS0 853 aaKnown RBP12.52□□□□□ -0.4
SUGP1-201ENST00000247001 LRRC4CQ9HCJ2 640 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 IL37Q9NZH6 218 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 MPP6Q9NZW5 540 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.4
SUGP1-201ENST00000247001 FAM92AA1XBS5 289 aa12.52□□□□□ -0.41
SUGP1-201ENST00000247001 VAV1P15498 845 aa12.52□□□□□ -0.41
SUGP1-201ENST00000247001 CTNNB1P35222 781 aa12.52□□□□□ -0.41
SUGP1-201ENST00000247001 SLC18A1P54219 525 aa12.52□□□□□ -0.41
SUGP1-201ENST00000247001 INHBCP55103 352 aa12.52□□□□□ -0.41
SUGP1-201ENST00000247001 HTRA4P83105 476 aaPredicted RBP12.52□□□□□ -0.41
SUGP1-201ENST00000247001 EIF4EBP2Q13542 120 aaPredicted RBP12.52□□□□□ -0.41
SUGP1-201ENST00000247001 BRMS1LQ5PSV4 323 aa12.52□□□□□ -0.41
SUGP1-201ENST00000247001 RNASEH2BQ5TBB1 312 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms