RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 FAM151AQ8WW52 585 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 KLHL32Q96NJ5 620 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 NAT9Q9BTE0 207 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PLAC1Q9HBJ0 212 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 EBF1Q9UH73 591 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SLC8A2Q9UPR5 921 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF839A8K0R7 811 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ASNA1O43681 348 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 GSRP00390 522 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ITGB3P05106 788 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CD1EP15812 388 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TCF7P36402 384 aaPredicted RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ETFBP38117 255 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CD97P48960 835 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 NDST2P52849 883 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 RAB14P61106 215 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PSME3P61289 254 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 NAPRTQ6XQN6 538 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 HERC6Q8IVU3 1022 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TUBGCP3Q96CW5 907 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CERS2Q96G23 380 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PAWRQ96IZ0 340 aaKnown RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 DEPDC7Q96QD5 511 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 LGMNQ99538 433 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CPNE1Q99829 537 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SYBUQ9NX95 663 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF232Q9UNY5 417 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 COQ6Q9Y2Z9 468 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TMEM114B3SHH9 223 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 USP12O75317 370 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 GCATO75600 419 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 BAIAP3O94812 1187 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 PRKCBP05771 671 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 SUPT20HL2P0C7V6 817 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 PORP16435 677 aaPredicted RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 CKMT2P17540 419 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 CCT3P49368 545 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 DPYSQ14117 519 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 IKBKEQ14164 716 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 ARL13AQ5H913 290 aaPredicted RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 DEPDC1Q5TB30 811 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 RPAP3Q9H6T3 665 aaPredicted RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 BFARQ9NZS9 450 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 HACD3Q9P035 362 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 ITGB1BP2Q9UKP3 347 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 WDR37Q9Y2I8 494 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 RBM47A0AV96 593 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 C2CD4BA6NLJ0 364 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF195O14628 629 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 CCR10P46092 362 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 EFNA5P52803 228 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 BLVRAP53004 296 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 TAF12Q16514 161 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 DGKDQ16760 1214 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 KRT27Q7Z3Y8 459 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 CLEC4FQ8N1N0 589 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 C7orf31Q8N865 590 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 URGCPQ8TCY9 931 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 BORCS5Q969J3 196 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 C12orf43Q96C57 262 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 BIRC8Q96P09 236 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 UNKQ9C0B0 810 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 VPS45Q9NRW7 570 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 MAP3K20Q9NYL2 800 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 KLHL8Q9P2G9 620 aaPredicted RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 HESX1Q9UBX0 185 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF70Q9UC06 446 aaPredicted RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 HEATR9A2RTY3 570 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 C7orf72A4D263 438 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 H3BNH8 94 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 GOLGA8TH3BQL2 631 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 H2AFYO75367 372 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 LTFP02788 710 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 RPL10P27635 214 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 AVPR1AP37288 418 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 IRF9Q00978 393 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 STX5Q13190 355 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 NEDD8Q15843 81 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 SNRNP48Q6IEG0 339 aaKnown RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 HORMAD1Q86X24 394 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 RIN3Q8TB24 985 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 ACE2Q9BYF1 805 aaPredicted RBP9.4□□□□□ -0.9
SRSF6-201ENST00000244020 NACA2Q9H009 215 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 SLC38A10Q9HBR0 1119 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 CCDC167Q9P0B6 97 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 HMGXB4Q9UGU5 601 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 IPPQ9Y573 584 aa9.4□□□□□ -0.9
SRSF6-201ENST00000244020 LOXHD1Q8IVV2 1947 aa9.4□□□□□ -0.91
SRSF6-201ENST00000244020 FOCADQ5VW36 1801 aa9.4□□□□□ -0.91
SRSF6-201ENST00000244020 KCNU1A8MYU2 1149 aa9.4□□□□□ -0.91
SRSF6-201ENST00000244020 TIPRLO75663 272 aa9.4□□□□□ -0.91
SRSF6-201ENST00000244020 ZBTB11O95625 1053 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms