RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 KLHL2O95198 593 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 PIGNO95427 931 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 COX4I1P13073 169 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 KCNE1P15382 129 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 RAG1P15918 1043 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 GABRB3P28472 473 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 TRIP10Q15642 601 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.33
SSPN-201ENST00000242729 FAM91A1Q658Y4 838 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 ESRP1Q6NXG1 681 aaKnown RBP17.14■□□□□ 0.33
SSPN-201ENST00000242729 IRGCQ6NXR0 463 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 TMEM135Q86UB9 458 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 RAB3IL1Q8TBN0 382 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 APBB2Q92870 758 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 ACE2Q9BYF1 805 aaPredicted RBP17.14■□□□□ 0.33
SSPN-201ENST00000242729 CDH19Q9H159 772 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 CYP4F12Q9HCS2 524 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 POMPQ9Y244 141 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 RNASEH1O60930 286 aaKnown RBP17.14■□□□□ 0.33
SSPN-201ENST00000242729 GRK2P25098 689 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 PLK1P53350 603 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 AQP4P55087 323 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 SDHAF4Q5VUM1 108 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 CEP97Q8IW35 865 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 NDNQ99608 321 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.33
SSPN-201ENST00000242729 TMLHEQ9NVH6 421 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 MPP6Q9NZW5 540 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 ZDHHC2Q9UIJ5 367 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 TLK1Q9UKI8 766 aa17.14■□□□□ 0.33
SSPN-201ENST00000242729 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
SSPN-201ENST00000242729 PLXNB2O15031 1838 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 MBLAC1A4D2B0 266 aaPredicted RBP17.13■□□□□ 0.33
SSPN-201ENST00000242729 AHSGP02765 367 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 KLF10Q13118 480 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 GRAMD1BQ3KR37 738 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 OR52E8Q6IFG1 317 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 GBA3Q9H227 469 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 TCF7L2Q9NQB0 619 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 RCOR3Q9P2K3 495 aaPredicted RBP17.13■□□□□ 0.33
SSPN-201ENST00000242729 TRIM13O60858 407 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 OR4Q2P0C623 313 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 GNAT1P11488 350 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
SSPN-201ENST00000242729 TSPAN8P19075 237 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 PPIDQ08752 370 aaKnown RBP17.13■□□□□ 0.33
SSPN-201ENST00000242729 TIGD5Q53EQ6 642 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 TOP6BLQ8N6T0 577 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 MYLPFQ96A32 169 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 NAT9Q9BTE0 207 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 CASS4Q9NQ75 786 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 ST3GAL5Q9UNP4 418 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 PCDHB12Q9Y5F1 795 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 TLL2Q9Y6L7 1015 aa17.13■□□□□ 0.33
SSPN-201ENST00000242729 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 F8W8V4 182 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 B3GAT3O94766 335 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 ENO3P13929 434 aaPredicted RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 HARS2P49590 506 aaKnown RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 CXCR3P49682 368 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 PTAR1Q7Z6K3 402 aaPredicted RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 LDB1Q86U70 411 aaPredicted RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 MFSD6LQ8IWD5 586 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 ZSCAN18Q8TBC5 510 aaPredicted RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 NXNL1Q96CM4 212 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 ANKRD27Q96NW4 1050 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 PPP1R10Q96QC0 940 aaKnown RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 TSC22D3Q99576 134 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 FICDQ9BVA6 458 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 C17orf102A2RUQ5 167 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 C9IYK1 514 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 LIN7AO14910 233 aaPredicted RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 SBK3P0C264 359 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 GJA9P57773 515 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 CNGA3Q16281 694 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 LSM12Q3MHD2 195 aaKnown RBP17.12■□□□□ 0.33
SSPN-201ENST00000242729 KCTD11Q693B1 232 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 EPGNQ6UW88 154 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 CYS1Q717R9 158 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 BRD8Q9H0E9 1235 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
SSPN-201ENST00000242729 LYNP07948 512 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 SCNN1AP37088 669 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 PSEN1P49768 467 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 MAXP61244 160 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 DLG1Q12959 904 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ARL13BQ3SXY8 428 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 CXCL17Q6UXB2 119 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 DHDDSQ86SQ9 333 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 FSTL5Q8N475 847 aaPredicted RBP17.11■□□□□ 0.33
SSPN-201ENST00000242729 CMTM5Q96DZ9 223 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 ZCWPW1Q9H0M4 648 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 VCXQ9H320 206 aa17.11■□□□□ 0.33
SSPN-201ENST00000242729 DNAJC28Q9NX36 388 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms