RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ATICP31939 592 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 STX2P32856 288 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 IFNAR2P48551 515 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 VPS41P49754 854 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 ARSEP51690 589 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 SRSF3P84103 164 aaKnown RBP8.16□□□□□ -1.1
CXCR4-201ENST00000241393 IL9RQ01113 521 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 ACVR2BQ13705 512 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 VGLL4Q14135 290 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF268Q14587 947 aaPredicted RBP8.16□□□□□ -1.1
CXCR4-201ENST00000241393 FAM187BQ17R55 369 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 CCDC38Q502W7 563 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 RNASEH2BQ5TBB1 312 aaKnown RBP8.16□□□□□ -1.1
CXCR4-201ENST00000241393 ATF7IP2Q5U623 682 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 PRAMEF18Q5VWM3 479 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 BBS12Q6ZW61 710 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 CENPUQ71F23 418 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 WDTC1Q8N5D0 677 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 HIPK4Q8NE63 616 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 MIS12Q9H081 205 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 SMARCAD1Q9H4L7 1026 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 HAUS2Q9NVX0 235 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 ARL2BPQ9Y2Y0 163 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 PAPPA2Q9BXP8 1791 aa8.16□□□□□ -1.1
CXCR4-201ENST00000241393 A0A0G2JLL6 359 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 EXOC1LA0A1B0GW35 172 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 LRRD1A4D1F6 860 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 C3orf70A6NLC5 250 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 FAM90A27PA6NNH2 459 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 TCP11X1B4DZS4 312 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 F8VP50 259 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 PI4K2BG5E9Z4 385 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 MAGEB2O15479 319 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 SEMA7AO75326 666 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 KRT3P12035 628 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 KRT10P13645 584 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 P4HA1P13674 534 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 YBX3P16989 372 aaKnown RBP eCLIP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 ATF7P17544 494 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 GJC1P36383 396 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 SKIV2L2P42285 1042 aaKnown RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 ID4P47928 161 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 IRX3P78415 501 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 TFAMQ00059 246 aaKnown RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 OGDHQ02218 1023 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 SLC25A11Q02978 314 aaKnown RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 CCDC15Q0P6D6 951 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 GPS1Q13098 491 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 RIPK1Q13546 671 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 GALNTL6Q49A17 601 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF667Q5HYK9 610 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 TREML2Q5T2D2 321 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 ZFYVE27Q5T4F4 411 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 BROXQ5VW32 411 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 DAB2IPQ5VWQ8 1189 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 CYB5D1Q6P9G0 228 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 SPATA21Q7Z572 469 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 PRRT2Q7Z6L0 340 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 TRABD2AQ86V40 505 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 CALML6Q8TD86 181 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 TFAP2BQ92481 460 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 AHCYL2Q96HN2 611 aaKnown RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 C9orf72Q96LT7 481 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 TACO1Q9BSH4 297 aaKnown RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 ASB7Q9H672 318 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 RPF1Q9H9Y2 349 aaKnown RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 SAYSD1Q9NPB0 183 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 KCNK9Q9NPC2 374 aa8.15□□□□□ -1.1
CXCR4-201ENST00000241393 PRMT7Q9NVM4 692 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.15□□□□□ -1.1
CXCR4-201ENST00000241393 A0A1B0GUA9 196 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 RASA4BC9J798 803 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 RASA4O43374 803 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 MGRN1O60291 552 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 LTFP02788 710 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 HMGCRP04035 888 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ENO2P09104 434 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 MCF2P10911 925 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CETPP11597 493 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PECAM1P16284 738 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PSMA2P25787 234 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 VIPR1P32241 457 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PHBP35232 272 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PCK1P35558 622 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 GABRB2P47870 512 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 MNAT1P51948 309 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SMAD3P84022 425 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ZNF200P98182 395 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SMAD2Q15796 467 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SNCBQ16143 134 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 WDR72Q3MJ13 1102 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PTPN20Q4JDL3 420 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ZNF484Q5JVG2 852 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 TMEM63BQ5T3F8 832 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 WDR78Q5VTH9 848 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 KAZNQ674X7 775 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 NUGGCQ68CJ6 796 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 VASNQ6EMK4 673 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CCDC62Q6P9F0 684 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms