RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 KIFC1Q9BW19 673 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 KLF11O14901 512 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 ADAM12O43184 909 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 SOD2P04179 222 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 HMBSP08397 361 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 MAPKAPK2P49137 400 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 MPP3Q13368 585 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 SPOUT1Q5T280 376 aaKnown RBP23.68■■□□□ 1.38
MSX2-201ENST00000239243 CDHR3Q6ZTQ4 885 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 IPMKQ8NFU5 416 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 PTCD2Q8WV60 388 aaKnown RBP23.68■■□□□ 1.38
MSX2-201ENST00000239243 FSD1LQ9BXM9 530 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 RETREG1Q9H6L5 497 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 SP110Q9HB58 689 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 NSMCE4AQ9NXX6 385 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 ATP11BQ9Y2G3 1177 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 USH1CQ9Y6N9 552 aa23.68■■□□□ 1.38
MSX2-201ENST00000239243 ABHD14A-ACY1A0A1B0GW23 586 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 MT-CYBP00156 380 aaPredicted RBP23.67■■□□□ 1.38
MSX2-201ENST00000239243 TROVE2P10155 538 aaKnown RBP eCLIP23.67■■□□□ 1.38
MSX2-201ENST00000239243 SPRP35270 261 aaPredicted RBP23.67■■□□□ 1.38
MSX2-201ENST00000239243 PDE1BQ01064 536 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 PARP15Q460N3 678 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 ALFQ53S48 1182 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 PCID2Q5JVF3 399 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 TPGS2Q68CL5 300 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 KYAT3Q6YP21 454 aaKnown RBP23.67■■□□□ 1.38
MSX2-201ENST00000239243 OTOAQ7RTW8 1153 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 MICALL1Q8N3F8 863 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 HMCESQ96FZ2 354 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 SLC25A51Q9H1U9 297 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 RASSF4Q9H2L5 321 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 ABCF3Q9NUQ8 709 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 CNTN5O94779 1100 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 ALDH3A1P30838 453 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 YBEYP58557 167 aaPredicted RBP23.67■■□□□ 1.38
MSX2-201ENST00000239243 KLHDC10Q6PID8 442 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 POTEHQ6S545 545 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 KCNMB4Q86W47 210 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 ZNF461Q8TAF7 563 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 ZNF398Q8TD17 642 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 IGSF8Q969P0 613 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 TOP1MTQ969P6 601 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 MFSD3Q96ES6 412 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 ZNF419Q96HQ0 510 aaPredicted RBP23.67■■□□□ 1.38
MSX2-201ENST00000239243 ZNF512Q96ME7 567 aaPredicted RBP23.67■■□□□ 1.38
MSX2-201ENST00000239243 ZNF558Q96NG5 402 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 VN1R3Q9BXE9 311 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 RXFP1Q9HBX9 757 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 CHRAC1Q9NRG0 131 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 SLC17A6Q9P2U8 582 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 PSAT1Q9Y617 370 aa23.67■■□□□ 1.38
MSX2-201ENST00000239243 RAMP2O60895 175 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 GLRA3O75311 464 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 IL1BP01584 269 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 RPL17P18621 184 aaKnown RBP23.66■■□□□ 1.38
MSX2-201ENST00000239243 SCTRP47872 440 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 CCDC15Q0P6D6 951 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 DBN1Q16643 649 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 MARC1Q5VT66 337 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 RAB3IL1Q8TBN0 382 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 TMEM169Q96HH4 297 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 RBBP8Q99708 897 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 FICDQ9BVA6 458 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 TSSK1BQ9BXA7 367 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 NACA2Q9H009 215 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 DCDC2Q9UHG0 476 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 CAPN7Q9Y6W3 813 aa23.66■■□□□ 1.38
MSX2-201ENST00000239243 H0YHG0 523 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 ALDOAP04075 364 aaKnown RBP23.65■■□□□ 1.38
MSX2-201ENST00000239243 CLTBP09497 229 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 TPH1P17752 444 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 ADRA1AP35348 466 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 PDPK2PQ6A1A2 396 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.65■■□□□ 1.38
MSX2-201ENST00000239243 PPHLN1Q8NEY8 458 aaKnown RBP23.65■■□□□ 1.38
MSX2-201ENST00000239243 VPS45Q9NRW7 570 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 C20orf96Q9NUD7 363 aaPredicted RBP23.65■■□□□ 1.38
MSX2-201ENST00000239243 F5H5T6 163 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 TPP1O14773 563 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 ABLIM3O94929 683 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 PEX11BO96011 259 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 TACR2P21452 398 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 CSE1LP55060 971 aaKnown RBP23.65■■□□□ 1.38
MSX2-201ENST00000239243 TNK2Q07912 1038 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 TEDDM1Q5T9Z0 273 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 ARMC2Q8NEN0 867 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 CLSTN3Q9BQT9 956 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 MRM3Q9HC36 420 aaKnown RBP23.65■■□□□ 1.38
MSX2-201ENST00000239243 SLC12A4Q9UP95 1085 aa23.65■■□□□ 1.38
MSX2-201ENST00000239243 C2CD2LO14523 706 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 BIRC5O15392 142 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 LIMK2P53671 638 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 DSG1Q02413 1049 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 IL10RBQ08334 325 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 POLD3Q15054 466 aaPredicted RBP23.64■■□□□ 1.38
MSX2-201ENST00000239243 INSCQ1MX18 579 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 HECTD3Q5T447 861 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 ATG16L1Q676U5 607 aa23.64■■□□□ 1.38
MSX2-201ENST00000239243 PKN3Q6P5Z2 889 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms