RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 PSMD13Q9UNM6 376 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 CACNA1CQ13936 2221 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 SLC37A4O43826 429 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 TNFRSF21O75509 655 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 LRATO95237 230 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 MATN4O95460 622 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 SPATA31D3P0C874 917 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 PPM1AP35813 382 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 POU5F1Q01860 360 aaKnown RBP13.38□□□□□ -0.27
NEK9-201ENST00000238616 HYIQ5T013 277 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 TSHZ1Q6ZSZ6 1077 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 SPATA31D4Q6ZUB0 917 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 SVOPQ8N4V2 548 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 PANX3Q96QZ0 392 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 PAIP1Q9H074 479 aaKnown RBP13.38□□□□□ -0.27
NEK9-201ENST00000238616 TKTL2Q9H0I9 626 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 TCF7L2Q9NQB0 619 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ANXA6P08133 673 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 EIF2S3P41091 472 aaKnown RBP13.38□□□□□ -0.27
NEK9-201ENST00000238616 CAMK1DQ8IU85 385 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 HTR1BP28222 390 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 NDST1P52848 882 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 BACE1P56817 501 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 DLG1Q12959 904 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ABRQ12979 859 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 LNX2Q8N448 690 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 UGT2B28Q9BY64 529 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 TSPAN16Q9UKR8 245 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ITGA1P56199 1179 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 FBXO30Q8TB52 745 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ZBTB10Q96DT7 871 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 JMJD4Q9H9V9 463 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 MAGEA13PA6NCF6 341 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ISM1B1AKI9 464 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 FBXO21O94952 628 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 CALB2P22676 271 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 NFIAQ12857 509 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 SAMD3Q8N6K7 520 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 KYQ8NBH2 561 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 PAFAH2Q99487 392 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 TM6SF2Q9BZW4 377 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 ENOPH1Q9UHY7 261 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 MRPS23Q9Y3D9 190 aaKnown RBP13.38□□□□□ -0.27
NEK9-201ENST00000238616 CD151P48509 253 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 NFE2Q16621 373 aaPredicted RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 OR56A4Q8NGH8 313 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 KAT5Q92993 513 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TEKT5Q96M29 485 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 CCDC177Q9NQR7 707 aaPredicted RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 CCDC182A6NF36 153 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 ZNF432O94892 652 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 RPA1P27694 616 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 SERPINA4P29622 427 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 LRPAP1P30533 357 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 S100A3P33764 101 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 PPP2R2BQ00005 443 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 GCNT7Q6ZNI0 430 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 FAM98AQ8NCA5 519 aaKnown RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 CRB1P82279 1406 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 DIDO1Q9BTC0 2240 aaKnown RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 NPC1L1Q9UHC9 1359 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3DA0A087WVF3 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3IA0A087WXS9 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3KA0A087X1G2 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3FA6NER0 549 aaPredicted RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3LB9A6J9 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 PGM3O95394 542 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3HP0C7X1 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 BMP7P18075 431 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 MMP13P45452 471 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 MASP1P48740 699 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
NEK9-201ENST00000238616 RAB2AP61019 212 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 SNRPFP62306 86 aaKnown RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 BEX3Q00994 111 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3CQ6IPX1 549 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 TBC1D3Q8IZP1 549 aaPredicted RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 ANKFN1Q8N957 763 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 CLN6Q9NWW5 311 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 WHRNQ9P202 907 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 MDC1Q14676 2089 aaKnown RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 TOP3BO95985 862 aaKnown RBP13.37□□□□□ -0.27
NEK9-201ENST00000238616 ADORA2AP29274 412 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 RXRGP48443 463 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 PIK3CGP48736 1102 aa13.37□□□□□ -0.27
NEK9-201ENST00000238616 FAM151AQ8WW52 585 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms