RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 KIZQ2M2Z5 673 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 STRADAQ7RTN6 431 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 TRIM74Q86UV6 250 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 TRIM73Q86UV7 250 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 RNF139Q8WU17 664 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 KIF12Q96FN5 646 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 ZNF597Q96LX8 424 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 CCT7Q99832 543 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 IL22Q9GZX6 179 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 SEMA6AQ9H2E6 1030 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 DPEP3Q9H4B8 488 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.78■□□□□ 0.12
DDX55-201ENST00000238146 VTI1BQ9UEU0 232 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 SLC39A10Q9ULF5 831 aa15.78■□□□□ 0.12
DDX55-201ENST00000238146 MAGED2Q9UNF1 606 aaPredicted RBP15.78■□□□□ 0.12
DDX55-201ENST00000238146 EVPLQ92817 2033 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 TRIM38O00635 465 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 ZSCAN9O15535 394 aaPredicted RBP15.77■□□□□ 0.12
DDX55-201ENST00000238146 CABYRO75952 493 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 APOA4P06727 396 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 CSRP3P50461 194 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 PTK2BQ14289 1009 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 CELF3Q5SZQ8 465 aaKnown RBP15.77■□□□□ 0.12
DDX55-201ENST00000238146 PSTKQ8IV42 348 aaKnown RBP15.77■□□□□ 0.12
DDX55-201ENST00000238146 TRIML2Q8N7C3 387 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 DNAAF3Q8N9W5 541 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 RDH11Q8TC12 318 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 GRIN3AQ8TCU5 1115 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 MAML3Q96JK9 1138 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 HAUS8Q9BT25 410 aa15.77■□□□□ 0.12
DDX55-201ENST00000238146 AP2A1O95782 977 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 GLRBP48167 497 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 ALDH3B2P48448 385 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 CSE1LP55060 971 aaKnown RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 COG7P83436 770 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 FRG1Q14331 258 aaKnown RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 GRM3Q14832 879 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 CERCAMQ5T4B2 595 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 PTAR1Q7Z6K3 402 aaPredicted RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 KCNMB4Q86W47 210 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 ERI1Q8IV48 349 aaKnown RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 STON2Q8WXE9 905 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 CXCL16Q9H2A7 254 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 LIN28AQ9H9Z2 209 aaKnown RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 C20orf96Q9NUD7 363 aaPredicted RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 ADA2Q9NZK5 511 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 KLHL8Q9P2G9 620 aaPredicted RBP15.77■□□□□ 0.11
DDX55-201ENST00000238146 AP4S1Q9Y587 144 aa15.77■□□□□ 0.11
DDX55-201ENST00000238146 ARHGEF37A1IGU5 675 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 SLCO1B7G3V0H7 640 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 H0YJX3 145 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 GOLGA8TH3BQL2 631 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 CSPG5O95196 566 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 H6PDO95479 791 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 IGBP1P78318 339 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 SULT2A1Q06520 285 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 IKBKEQ14164 716 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 RBM12BQ8IXT5 1001 aaKnown RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 ASB9Q96DX5 294 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 SPATA33Q96N06 139 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 CASS4Q9NQ75 786 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 IARS2Q9NSE4 1012 aaKnown RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 HEMK1Q9Y5R4 338 aaPredicted RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 SCN1AP35498 2009 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 C9IYK1 514 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 PHGDHO43175 533 aaKnown RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 HBP1O60381 514 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 C22orf31O95567 290 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 CYP2C8P10632 490 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 NELFEP18615 380 aaKnown RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 SAT1P21673 171 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 ADORA2BP29275 332 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 SCNN1AP37088 669 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 CDK9P50750 372 aaKnown RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 PITX1P78337 314 aaPredicted RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 DPYSQ14117 519 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 TRIM25Q14258 630 aaKnown RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 CARM1Q86X55 608 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 OR6B3Q8NGW1 331 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 LRTOMTQ8WZ04 291 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 ABTB1Q969K4 478 aaPredicted RBP15.76■□□□□ 0.11
DDX55-201ENST00000238146 PCDHAC1Q9H158 963 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 CHRAC1Q9NRG0 131 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 TLK1Q9UKI8 766 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 PCDHGA7Q9Y5G6 932 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 LOC285556D6RIA3 1793 aa15.76■□□□□ 0.11
DDX55-201ENST00000238146 TMEM233B4DJY2 109 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 C8BP07358 591 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 PTPN3P26045 913 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 MATKP42679 507 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 PRKAA2P54646 552 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 BST2Q10589 180 aaKnown RBP15.75■□□□□ 0.11
DDX55-201ENST00000238146 TMED1Q13445 227 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 LPIN1Q14693 890 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 ANO4Q32M45 955 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 DUS1LQ6P1R4 473 aaKnown RBP15.75■□□□□ 0.11
DDX55-201ENST00000238146 LBX2Q6XYB7 198 aa15.75■□□□□ 0.11
DDX55-201ENST00000238146 DEFB106AQ8N104 65 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms