RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ANO7Q6IWH7 933 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 FAM72DQ6L9T8 149 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 CEP68Q76N32 757 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 POLNQ7Z5Q5 900 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 KIAA1328Q86T90 577 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 KBTBD6Q86V97 674 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 NLRP14Q86W24 1093 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 RASSF3Q86WH2 238 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 FAM72BQ86X60 149 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 ARFGAP1Q8N6T3 406 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 NETO1Q8TDF5 533 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 SORCS1Q8WY21 1168 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 HSPH1Q92598 858 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 BTBD6Q96KE9 485 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 ACOX2Q99424 681 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 SPON2Q9BUD6 331 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 ARRDC1-AS1Q9H2J1 176 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 TMEM245Q9H330 911 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
SF3B6-201ENST00000233468 RCOR3Q9P2K3 495 aaPredicted RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 INTS6Q9UL03 887 aaKnown RBP11.55□□□□□ -0.56
SF3B6-201ENST00000233468 THADAQ6YHU6 1953 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 EDDM13A0A1B0GTR0 161 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 A0A1W2PQF6 199 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 LRP3O75074 770 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 RARAP10276 462 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ACADMP11310 421 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 IRAK1P51617 712 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 NDST2P52849 883 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 HADHBP55084 474 aaKnown RBP11.54□□□□□ -0.56
SF3B6-201ENST00000233468 NAP1L1P55209 391 aaKnown RBP11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ZBTB16Q05516 673 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 KIF5AQ12840 1032 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 PDK2Q15119 407 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 PTPRNQ16849 979 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 HNRNPA1L2Q32P51 320 aaKnown RBP11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ACCSLQ4AC99 568 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 KCNT1Q5JUK3 1230 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 DSG4Q86SJ6 1040 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ZNF354CQ86Y25 554 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 PYROXD2Q8N2H3 581 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ATP11CQ8NB49 1132 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 KCTD6Q8NC69 237 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 OR2T3Q8NH03 318 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 HMGB4Q8WW32 186 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 PRCCQ92733 491 aaPredicted RBP11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ALG14Q96F25 216 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ZDHHC4Q9NPG8 344 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.54□□□□□ -0.56
SF3B6-201ENST00000233468 DNAI1Q9UI46 699 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 HCN2Q9UL51 889 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 SCML1Q9UN30 329 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 OR51B4Q9Y5P0 310 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 CHD6Q8TD26 2715 aa11.54□□□□□ -0.56
SF3B6-201ENST00000233468 ZFHX4Q86UP3 3567 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 ANTXRLA6NF34 631 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 ARHGAP42A6NI28 874 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 TMEM110-MUSTN1A8MSY1 372 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 BTNL10A8MVZ5 291 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 WASH3PC4AMC7 463 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 CBX4O00257 560 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 ARHGAP6O43182 974 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 SPOPO43791 374 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 RPP40O75818 363 aaKnown RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 PRKCHP24723 683 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 SERPINB6P35237 376 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 RECQLP46063 649 aaPredicted RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 VAV2P52735 878 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 CDH6P55285 790 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 SLC25A11Q02978 314 aaKnown RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 CAMK2GQ13555 558 aaPredicted RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 SMTNL2Q2TAL5 461 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 TTC31Q49AM3 519 aaPredicted RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 LRRC38Q5VT99 294 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 UMODL1-AS1Q8N2C9 162 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 MDGA1Q8NFP4 955 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 UBE2Q2Q8WVN8 375 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 CASKIN2Q8WXE0 1202 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 ARHGEF2Q92974 986 aaKnown RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 SIPA1Q96FS4 1042 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 MRGPRX3Q96LB0 322 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 PEBP4Q96S96 227 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 TSGA10Q9BZW7 698 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 CEP44Q9C0F1 390 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 GPATCH2LQ9NWQ4 482 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 ZNF212Q9UDV6 495 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 HS3ST2Q9Y278 367 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
SF3B6-201ENST00000233468 RAD54BQ9Y620 910 aa11.53□□□□□ -0.56
SF3B6-201ENST00000233468 ZZEF1O43149 2961 aa11.52□□□□□ -0.56
SF3B6-201ENST00000233468 A0A0D9SEW6 157 aa11.52□□□□□ -0.57
SF3B6-201ENST00000233468 DCLK1O15075 740 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms