RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TUFMP49411 452 aaKnown RBP30.22■■■□□ 2.43
PABPN1-201ENST00000216727 IKBKEQ14164 716 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 C1orf53Q5VUE5 145 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 KYAT3Q6YP21 454 aaKnown RBP30.22■■■□□ 2.43
PABPN1-201ENST00000216727 ENTPD7Q9NQZ7 604 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 H0YHG0 523 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 CNTN5O94779 1100 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 TPH1P17752 444 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 ADRA1AP35348 466 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 TRIM60Q495X7 471 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 TEDDM1Q5T9Z0 273 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 TFAP2DQ7Z6R9 452 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 ARMC2Q8NEN0 867 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 IGSF8Q969P0 613 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 ISL2Q96A47 359 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 IGSF21Q96ID5 467 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 RBBP8Q99708 897 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 CCSER2Q9H7U1 834 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 SIRPGQ9P1W8 387 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 ZNF212Q9UDV6 495 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 GGT7Q9UJ14 662 aa30.22■■■□□ 2.43
PABPN1-201ENST00000216727 HBS1LQ9Y450 684 aaKnown RBP30.22■■■□□ 2.43
PABPN1-201ENST00000216727 MRPL42Q9Y6G3 142 aaKnown RBP30.22■■■□□ 2.43
PABPN1-201ENST00000216727 TPP1O14773 563 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 UPP2O95045 317 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 TGDSO95455 350 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 TROVE2P10155 538 aaKnown RBP eCLIP30.21■■■□□ 2.43
PABPN1-201ENST00000216727 BGNP21810 368 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 ALDH3A1P30838 453 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 RENBPP51606 427 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 RAP1GAP2Q684P5 730 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 DENND5AQ6IQ26 1287 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 CNKSR3Q6P9H4 555 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 VN1R3Q9BXE9 311 aa30.21■■■□□ 2.43
PABPN1-201ENST00000216727 BIRC5O15392 142 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 NEFHP12036 1026 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 SPRP35270 261 aaPredicted RBP30.2■■■□□ 2.43
PABPN1-201ENST00000216727 PDE1BQ01064 536 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 BNIP1Q12981 228 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 FAM133BQ5BKY9 247 aaKnown RBP30.2■■■□□ 2.43
PABPN1-201ENST00000216727 PCID2Q5JVF3 399 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 IPMKQ8NFU5 416 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 RAB3IL1Q8TBN0 382 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 OVCA2Q8WZ82 227 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 ATP2A3Q93084 1043 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 HMCESQ96FZ2 354 aa30.2■■■□□ 2.43
PABPN1-201ENST00000216727 NEBLO76041 1014 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 OR1D2P34982 312 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 PDE1CQ14123 709 aaPredicted RBP30.2■■■□□ 2.42
PABPN1-201ENST00000216727 DBN1Q16643 649 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 SNX30Q5VWJ9 437 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 KCNMB4Q86W47 210 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 SLC25A51Q9H1U9 297 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 DCDC2Q9UHG0 476 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 TBX21Q9UL17 535 aa30.2■■■□□ 2.42
PABPN1-201ENST00000216727 GLRA3O75311 464 aa30.19■■■□□ 2.42
PABPN1-201ENST00000216727 LIMK2P53671 638 aa30.19■■■□□ 2.42
PABPN1-201ENST00000216727 MPP3Q13368 585 aa30.19■■■□□ 2.42
PABPN1-201ENST00000216727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP30.19■■■□□ 2.42
PABPN1-201ENST00000216727 PTCD2Q8WV60 388 aaKnown RBP30.19■■■□□ 2.42
PABPN1-201ENST00000216727 THOC1Q96FV9 657 aaKnown RBP30.19■■■□□ 2.42
PABPN1-201ENST00000216727 FICDQ9BVA6 458 aa30.19■■■□□ 2.42
PABPN1-201ENST00000216727 CRISPLD2Q9H0B8 497 aa30.19■■■□□ 2.42
PABPN1-201ENST00000216727 HSFX1Q9UBD0 423 aa30.19■■■□□ 2.42
PABPN1-201ENST00000216727 HMBSP08397 361 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 MAGEA12P43365 314 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 TNK2Q07912 1038 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 INSCQ1MX18 579 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 HSP90AA5PQ58FG0 334 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 ARMC3Q5W041 872 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 PKN3Q6P5Z2 889 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 POTEHQ6S545 545 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 STRA8Q7Z7C7 330 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 PDZD8Q8NEN9 1154 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 C20orf96Q9NUD7 363 aaPredicted RBP30.18■■■□□ 2.42
PABPN1-201ENST00000216727 AFF4Q9UHB7 1163 aaKnown RBP30.18■■■□□ 2.42
PABPN1-201ENST00000216727 MAGED2Q9UNF1 606 aaPredicted RBP30.18■■■□□ 2.42
PABPN1-201ENST00000216727 C2CD2LO14523 706 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 DCTN3O75935 186 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 NMBRP28336 390 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 CSE1LP55060 971 aaKnown RBP30.18■■■□□ 2.42
PABPN1-201ENST00000216727 PDPK2PQ6A1A2 396 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 RANBP10Q6VN20 620 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 RPRD1AQ96P16 312 aaPredicted RBP30.18■■■□□ 2.42
PABPN1-201ENST00000216727 AGAP2Q99490 1192 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 MCMBPQ9BTE3 642 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 TRIM55Q9BYV6 548 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 NPHS2Q9NP85 383 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 NSMCE4AQ9NXX6 385 aa30.18■■■□□ 2.42
PABPN1-201ENST00000216727 BPGMP07738 259 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 SETDB1Q15047 1291 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 PARP15Q460N3 678 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 ATG16L1Q676U5 607 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 TEX26Q8N6G2 289 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 ANKLE1Q8NAG6 615 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 MRGPRX2Q96LB1 330 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 MRM3Q9HC36 420 aaKnown RBP30.17■■■□□ 2.42
PABPN1-201ENST00000216727 DNMT3LQ9UJW3 386 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 RPL17P18621 184 aaKnown RBP30.17■■■□□ 2.42
PABPN1-201ENST00000216727 ATP5C1P36542 298 aaKnown RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms