RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fzd6Q61089 709 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Eif2dQ61211 570 aaKnown RBP16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Znf148Q61624 794 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Q8BGA7 448 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Zbtb44Q8R0A2 453 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cox18Q8VC74 331 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tceal1Q921P9 165 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mxra7Q9CZH7 178 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 Subh2bvQ9D9Z7 123 aa16.18■□□□□ 0.18
Trim39-203ENSMUST00000113706 DldO08749 509 aaKnown RBP16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Krt80Q0VBK2 452 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Arhgap45Q3TBD2 1116 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Upf3aQ3ULJ3 422 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Trcg1Q58Y74 825 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Slc6a4Q60857 630 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ccnt2Q7TQK0 723 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Stk38lQ7TSE6 464 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tspan33Q8R3S2 283 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tfap2dQ91ZK0 452 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 MajinQ9D992 256 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Znrf4Q9DAH2 327 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Slc2a5Q9WV38 501 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Trbv4A0A075B5I2 113 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Aldoart1A6ZI46 419 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Krt26Q3TRJ4 462 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Htr1aQ64264 421 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 PreplQ8C167 725 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 TgdsQ8VDR7 355 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Fam227bQ9D518 532 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 MrgbpQ9DAT2 204 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 PllpQ9DCU2 182 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tlr9Q9EQU3 1032 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Kdelc1Q9JHP7 502 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Msh5Q9QUM7 833 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 C1qtnf1Q9QXP7 281 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cib2Q9Z309 187 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Man2b1O09159 1013 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Fgf10O35565 209 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Klf1P46099 358 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Krt32Q62168 407 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ankrd6Q69ZU8 712 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Tmcc1Q69ZZ6 649 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ppp6r2Q8R3Q2 923 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Aco2Q99KI0 780 aaKnown RBP16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Rwdd4Q9CPR1 188 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 GghQ9Z0L8 317 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 MycsQ9Z304 431 aa16.17■□□□□ 0.18
Trim39-203ENSMUST00000113706 Itga9B8JK39 1036 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Scg3P47867 471 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Inpp5jP59644 1003 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 DselQ0VBN2 1207 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Nr2c1Q505F1 590 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 BoraQ8BS90 525 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Aph1bQ8C7N7 257 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ubap2Q91VX2 1132 aaKnown RBP16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mrpl9Q99N94 265 aaKnown RBP16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pgm1Q9D0F9 562 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 ArskQ9D2L1 553 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 MycbpQ9EQS3 103 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Igkv17-121A0A0G2JFA8 117 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Slc2a7P0C6A1 513 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 PenkP22005 268 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Sec1P97353 368 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Klhdc10Q6PAR0 439 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Hmgxb4Q80Y32 594 aaKnown RBP16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ccdc40Q8BI79 1192 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Fam204aQ8C6C7 236 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ero1aQ8R180 464 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Mgat5Q8R4G6 740 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Olfr345Q8VGK4 311 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Fads1Q920L1 447 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Atad3Q925I1 591 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Grk2Q99MK8 689 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Acot13Q9CQR4 140 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Dtwd1Q9D8U7 304 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 GatmQ9D964 423 aaKnown RBP16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Cacng3Q9JJV5 315 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Chrac1Q9JKP8 129 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 IkbkeQ9R0T8 717 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Smarcb1Q9Z0H3 385 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Top3bQ9Z321 862 aaKnown RBP16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Scn5aQ9JJV9 2019 aa16.16■□□□□ 0.18
Trim39-203ENSMUST00000113706 Myo18aQ9JMH9 2050 aaKnown RBP16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Zfp963D3Z2T8 383 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Gm3642K7N6V4 267 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 C1qbpO35658 278 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Syngr1O55100 234 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Psma3O70435 255 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Dact3Q0PHV7 610 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Grid2Q61625 1007 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Dmc1Q61880 340 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 ScapQ6GQT6 1276 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Podnl1Q6P3Y9 559 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ticam2Q8BJQ4 232 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Hdac7Q8C2B3 938 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Q8CDN1 933 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pofut2Q8VHI3 429 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Pcdhb13Q91Y06 796 aa16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Msi2Q920Q6 346 aaKnown RBP16.15■□□□□ 0.18
Trim39-203ENSMUST00000113706 Ola1Q9CZ30 396 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms