RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Spred2Q924S7 410 aa18.64■□□□□ 0.57
Trim47-202ENSMUST00000106441 Wars2Q9CYK1 360 aa18.64■□□□□ 0.57
Trim47-202ENSMUST00000106441 Batf3Q9D275 118 aa18.64■□□□□ 0.57
Trim47-202ENSMUST00000106441 Slamf8Q9D3G2 278 aa18.64■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ppp2r3cQ9JK24 453 aa18.64■□□□□ 0.57
Trim47-202ENSMUST00000106441 Slfn9B1ARD6 910 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Usp51B1AY15 661 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Cd2P08920 344 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Tac1P41539 130 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Abce1P61222 599 aaKnown RBP18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Bop1P97452 732 aaKnown RBP18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Caprin2Q05A80 1031 aaKnown RBP18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ag2Q3UPL5 249 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Nomo1Q6GQT9 1214 aaKnown RBP18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Chst10Q6PGK7 356 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Olfr293Q7TS10 336 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Q8BHN7 327 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fbxw21Q8BI38 468 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Smarcal1Q8BJL0 910 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ankrd52Q8BTI7 1076 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 LnpepQ8C129 1025 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Aph1bQ8C7N7 257 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mob2Q8VI63 235 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Usp3Q91W36 520 aaKnown RBP18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fuca2Q99KR8 461 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Med21Q9CQ39 144 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 4930513O06RikQ9D549 161 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ccdc97Q9DBT3 340 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Rpl9-ps1S4R1R7 191 aa18.63■□□□□ 0.57
Trim47-202ENSMUST00000106441 Slc4a11A2AJN7 862 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ttc30a2A2AKQ8 664 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Taf4E9QAP7 1042 aaKnown RBP18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ebf3O08791 596 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 AlbP07724 608 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 LdlrP35951 862 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 DmwdQ08274 665 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ptcd3Q14C51 685 aaKnown RBP18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Q3U4G0 281 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 GnsQ8BFR4 544 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Usp1Q8BJQ2 784 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Brat1Q8C3R1 822 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Creld1Q91XD7 420 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 RalbQ9JIW9 206 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Tubd1Q9R1K7 455 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ttc3O88196 1979 aaKnown RBP18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sh2d4bA6X942 431 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Galntl6E5D8G1 601 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mcpt1P11034 246 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 DsppP97399 934 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 ArvcfP98203 962 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Nek10Q3UGM2 1111 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Usp17laQ61068 526 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 EfsQ64355 560 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Rasa4Q6PFQ7 802 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ckap2lQ7TS74 745 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Afap1l1Q8BZI0 768 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pde10aQ8CA95 790 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Abi1Q8CBW3 481 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sult5a1Q91X36 291 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pcdha1Q91Y21 948 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Lpin1Q91ZP3 924 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fuca1Q99LJ1 452 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Lpin3Q99PI4 848 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Sike1Q9CPR7 207 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Dach1Q9QYB2 751 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 Zfp236S4R299 1847 aa18.62■□□□□ 0.57
Trim47-202ENSMUST00000106441 DgkdE9PUQ8 1220 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm10722F6VLK5 217 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 P04214 136 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pim1P06803 397 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Ap1g1P22892 822 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Vps4bP46467 444 aaKnown RBP18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Lypla1P97823 230 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Rplp2P99027 115 aaKnown RBP18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Agap2Q3UHD9 1186 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Znf235Q61116 645 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Crb2Q80YA8 1282 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 KyQ8C8H8 661 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 DutQ8VCG1 200 aaKnown RBP18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Zdhhc7Q91WU6 308 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Cog2Q921L5 731 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Clp1Q99LI9 425 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Chst12Q99LL3 419 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Katnal2Q9D3R6 539 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Noxred1Q9D3S5 366 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Tle6Q9WVB3 581 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 1110002E22RikE0CYV9 1786 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Iqcj-Schip1A0A088MLT8 559 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Gm8369E9PZI3 166 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Vmn1r39G3UWE6 305 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Schip1P0DPB4 484 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fdft1P53798 416 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pdcd1Q02242 288 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pyroxd1Q3TMV7 498 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Trafd1Q3UDK1 580 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pcnx4Q3UVY5 1174 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Fam129aQ3UW53 926 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Mxd4Q60948 209 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Pde1aQ61481 565 aa18.61■□□□□ 0.57
Trim47-202ENSMUST00000106441 Crtc1Q68ED7 630 aa18.61■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms