RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Il2P04351 169 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Atxn10P28658 475 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ccr5P51682 354 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc22a16Q497L8 649 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fam160a1Q505K2 1081 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fastkd1Q6DI86 829 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 ChfrQ810L3 664 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pdk1Q8BFP9 434 aaKnown RBP11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Dyrk4Q8BI55 632 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc41a1Q8BJA2 512 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Hspbap1Q8BK58 483 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nlrp4bQ8C6J9 863 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tspan3Q9QY33 253 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Map3k14Q9WUL6 942 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nfx1B1AY10 1114 aaKnown RBP11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Zfp358E9Q8M1 571 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cyp2j12G3UXT0 502 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 E230025N22RikG5E8S3 482 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm7942L7N277 499 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ptpn9O35239 593 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 RapsnP12672 412 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ptpn1P35821 432 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Eps8Q08509 821 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 HdxQ14B70 692 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Zfp217Q3U0X6 1041 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ecm1Q61508 559 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nomo1Q6GQT9 1214 aaKnown RBP11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Galnt10Q6P9S7 603 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cept1Q8BGS7 416 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ipo11Q8K2V6 975 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Zcchc14Q8VIG0 956 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Unc45aQ99KD5 944 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Haus8Q99L00 373 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 P2yr13Q9D8I2 337 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Slc23a1Q9Z2J0 605 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 PatjQ63ZW7 1834 aa11.76□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gbp6A0A0G2JDV3 611 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mkrn2osD3Z393 217 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Erich2E9Q1A6 463 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 DmpkP54265 631 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mgat3Q10470 538 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 P3h1Q3V1T4 739 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Scn2bQ56A07 215 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Nqo1Q64669 274 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Arl5cQ6P068 179 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Rxfp1Q6R6I7 758 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Rpl10Q6ZWV3 214 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Arrdc3Q7TPQ9 414 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Bmp3Q8BHE5 468 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cdkn2aipQ8BI72 563 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ankrd52Q8BTI7 1076 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 ClyblQ8R4N0 338 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Rnf111Q99ML9 989 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ssxb1Q9CPU1 170 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tbc1d20Q9D9I4 402 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 CdylQ9WTK2 593 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ap4s1Q9WVL1 144 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Igf2rQ07113 2483 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cntnap5aQ0V8T9 1304 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ercc2O08811 760 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Vps4bP46467 444 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 CblbQ3TTA7 982 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm5431Q5NCB3 844 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mtnr1aQ61184 353 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Abcd2Q61285 741 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 PtprrQ62132 656 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tigd3Q7TM95 470 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Olfr293Q7TS10 336 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fbxw21Q8BI38 468 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Mapkap1Q8BKH7 522 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cndp1Q8BUG2 492 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Clptm1lQ8BXA5 539 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Cog4Q8R1U1 785 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Smim14Q91VT8 99 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Usp3Q91W36 520 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Pcdhb13Q91Y06 796 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Acbd6Q9D061 282 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Fam90a1bQ9D4F3 419 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Clca1Q9D7Z6 913 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tsga13Q9DA17 273 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 MecrQ9DCS3 373 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Asap1Q9QWY8 1147 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Sept6Q9R1T4 434 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ddx39bQ9Z1N5 428 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Arid3bQ9Z1N7 568 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Unc80Q8BLN6 3261 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 PhipQ8VDD9 1821 aaKnown RBP11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ankrd34aB2RW11 495 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Matn2O08746 956 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Trdmt1O55055 415 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 PpargP37238 505 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Atoh1P48985 351 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tmprss15P97435 1069 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ptchd3Q0EEE2 906 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Ripply1Q2WG77 201 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Gm1604bQ3TRG0 118 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Foxred2Q3USW5 665 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Trim75Q3UWZ0 467 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 Tas2r125Q7M710 311 aa11.75□□□□□ -0.53
Col9a1-202ENSMUST00000088349 GnsQ8BFR4 544 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms