RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Mrfap1Q9CQL7 125 aa18.89■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Fbxl12Q9EPX5 326 aa18.89■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Cwc15Q9JHS9 229 aaKnown RBP18.89■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Ror1Q9Z139 937 aa18.89■□□□□ 0.61
Vti1b-201ENSMUST00000055262 OtofQ9ESF1 1997 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Gm13283A0A087WPG5 182 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Igkv10-95A0A0G2JFY3 115 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 AspgA0JNU3 564 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Adamts6D3Z1A5 1117 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Speer2E9Q9U2 264 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Il13ra1O09030 424 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Opn1mwO35599 359 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Enc1O35709 589 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Ap3d1O54774 1199 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Slc22a2O70577 553 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Tap1P21958 724 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Ap1m1P35585 423 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 CskP41241 450 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Il12aP43431 215 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 InhbcP55104 352 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Ncf4P97369 339 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Dnajb13Q80Y75 316 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 4933402J07RikQ8BHX0 270 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Fam221bQ8C627 487 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Uba6Q8C7R4 1053 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 RhoqQ8R527 205 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Cd300ldQ8VCH2 221 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Rgs18Q99PG4 235 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Rrp15Q9CYX7 281 aaKnown RBP18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Hddc3Q9D114 179 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 CtsrQ9JIA9 334 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Herpud2Q9JJC9 404 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Magel2Q9QZ04 1284 aa18.88■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Chd7A2AJK6 2986 aaKnown RBP18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Tubb1A2AQ07 451 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Prrg1A2BFE8 218 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Gm13285B1AYI3 182 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Gm13275B1AYI8 182 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Bub1O08901 1058 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Pold2O35654 469 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Npr1P18293 1057 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Adh5P28474 374 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Eif3eP60229 445 aaKnown RBP18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Rcsd1Q3UZA1 412 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 EndouQ3V188 412 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 FntaQ61239 377 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Glra2Q7TNC8 452 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 SrlQ7TQ48 910 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zmpste24Q80W54 475 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zfp719Q8BIV1 735 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 IfnzQ8BQT1 182 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Trmt10aQ8C1Z8 328 aaKnown RBP18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Cstf2tQ8C7E9 632 aaKnown RBP18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Gm13278Q8CD73 182 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Fam228aQ8CDW1 299 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Mat1aQ91X83 396 aaKnown RBP18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Cts3Q91ZD5 332 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Nek8Q91ZR4 698 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Phospho2Q9D9M5 241 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Orc1Q9Z1N2 840 aaKnown RBP18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Diaph3Q9Z207 1171 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Vps13aQ5H8C4 3166 aa18.87■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Apol7bB1AQP7 369 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Pabpc1P29341 636 aaKnown RBP18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Slc6a13P31649 602 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 SmoP56726 793 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zbtb48Q1H9T6 681 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zmym5Q3U2E2 627 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Lipo3Q3UT41 399 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Apol7eQ3UZ24 369 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Stard3Q61542 446 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Hsph1Q61699 858 aaKnown RBP18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Hs3st2Q673U1 367 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Bcas1Q80YN3 633 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Them6Q80ZW2 207 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Hpcal4Q8BGZ1 191 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zbtb46Q8BID6 600 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Psapl1Q8C1C1 522 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Gbp5Q8CFB4 590 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Oas1dQ8VI95 361 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Ogfod2Q9CQ04 349 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Vps28Q9D1C8 221 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Ndufv2Q9D6J6 248 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Tspan17Q9D7W4 270 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Fundc1Q9DB70 155 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Vwa7Q9JHA8 891 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Cpb2Q9JHH6 422 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Scnn1gQ9WU39 655 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Slfn2Q9Z0I6 378 aa18.86■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zfp174B9EJW5 407 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Scgb2b7D3YYY1 112 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Srsf11E9Q6E5 511 aaKnown RBP18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Hsd17b7O88736 334 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zp3P10761 424 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 PolP11369 1281 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zfp42P22227 288 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Drg1P32233 367 aaKnown RBP18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Atp8a1P70704 1164 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 GsapQ3TCV3 858 aa18.85■□□□□ 0.61
Vti1b-201ENSMUST00000055262 Zmym1Q3TJB1 983 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms