RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Eef1gQ9D8N0 437 aaKnown RBP20.48■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Serpina1fQ9DCQ7 411 aa20.48■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Cyth1Q9QX11 398 aa20.48■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Srpk3Q9Z0G2 565 aa20.48■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Zscan4dA7KBS4 506 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Cilp2D3Z7H8 1162 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Vmn2r67K7N6T2 851 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Ptpn9O35239 593 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Gna12P27600 379 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 RxrgP28705 463 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Zfp607aQ3TQG9 686 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Tnks2Q3UES3 1166 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Cog7Q3UM29 770 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Olfr121Q5CZY0 321 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Stip1Q60864 543 aaKnown RBP20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Sema4aQ62178 760 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Lrig3Q6P1C6 1117 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Kif11Q6P9P6 1052 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Arrb1Q8BWG8 418 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Pex5lQ8C437 567 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Cyp2d26Q8CIM7 500 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Fermt3Q8K1B8 665 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Prpf39Q8K2Z2 665 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 IntS13Q8QZV7 732 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Dpp3Q99KK7 738 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Serbp1Q9CY58 407 aaKnown RBP20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 4931423N10RikQ9D4J9 382 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Abcg8Q9DBM0 673 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 SrfQ9JM73 504 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Dio2Q9Z1Y9 266 aa20.47■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Fer1l4A3KGK3 1992 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 CenpeQ6RT24 2474 aaKnown RBP20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 A0A286YDP4 300 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Gm13101A2ASJ0 481 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Srsf11E9Q6E5 511 aaKnown RBP20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Arfip1G5E8V9 373 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Gcm2O09102 504 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Epha8O09127 1004 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 IlkO55222 452 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Pip4k2aO70172 405 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Zfy2P20662 777 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Serpina3cP29621 417 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 NsfP46460 744 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Casp4P70343 373 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Gjb6P70689 261 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Arf5P84084 180 aaKnown RBP20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Taar8aQ5QD07 344 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 SugctQ7TNE1 436 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Trerf1Q8BXJ2 1205 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Tmx3Q8BXZ1 456 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Nup85Q8R480 656 aaKnown RBP20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Cbwd1Q8VEH6 393 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Rev1Q920Q2 1249 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Aco2Q99KI0 780 aaKnown RBP20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Rnf225Q9D7D1 332 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Mzb1Q9D8I1 188 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 SelenooQ9DBC0 667 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Il18bpQ9Z0M9 193 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Dpp6Q9Z218 804 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Znf536Q8K083 1302 aa20.46■□□□□ 0.87
Ttc39b-201ENSMUST00000030205 Arhgap42B2RQE8 841 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Gm4297D3YWB7 211 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Gm3594E9Q2A7 267 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 RngttO55236 597 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Xrcc5P27641 732 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Nr2c2P49117 596 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 LipeP54310 759 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Ppm1hQ3UYC0 513 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Fzd6Q61089 709 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 HiraQ61666 1015 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Sema5aQ62217 1077 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Tmem145Q8C4U2 746 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Fstl3Q9EQC7 256 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 IvdQ9JHI5 424 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 SetxA2AKX3 2646 aa20.45■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Rhox3fA2ANE1 215 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 NagluO88325 739 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Avpr2O88721 371 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Ctla2bP12400 113 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Pou2f3P31362 431 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Mapkapk2P49138 386 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Rhox5P52651 210 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Opa1P58281 960 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Smad1P70340 465 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Fam172aQ3TNH5 417 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Cyp2j11Q3UNV2 504 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Eef2kmtQ3UZW7 335 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Bpifb1Q61114 474 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 HrQ61645 1182 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Med16Q6PGF3 828 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Ofcc1Q8BGX4 166 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Hus1Q8BQY8 280 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Dennd1aQ8K382 1016 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Hbp1Q8R316 516 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Wdr98Q8VC42 657 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Zfp810Q99K45 461 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Exoc2Q9D4H1 924 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Slc25a19Q9DAM5 318 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Chrna6Q9R0W9 494 aa20.44■□□□□ 0.86
Ttc39b-201ENSMUST00000030205 Prob1A0A087WR45 1010 aa20.43■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms