RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 RUNX1T1Q06455 604 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 FNDC3BQ53EP0 1204 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 PRRT2Q7Z6L0 340 aaPredicted RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 MILR1Q7Z6M3 343 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 ADCK1Q86TW2 530 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 SYTL1Q8IYJ3 562 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 METTL6Q8TCB7 284 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 NUDT5Q9UKK9 219 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 MAGEA13PA6NCF6 341 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 CILPO75339 1184 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 BMP10O95393 424 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 STAU1O95793 577 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 NFKB1P19838 968 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 S100A5P33763 92 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 HTR7P34969 479 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 COL9A3Q14050 684 aaPredicted RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 NPNTQ6UXI9 565 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.66□□□□□ -0.223e-7■■□□□ 13.8
PTPRVP-205ENST00000641549 MAPRE3Q9UPY8 281 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 BTN3A1O00481 513 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 GJB1P08034 283 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 LTA4HP09960 611 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 ERCC2P18074 760 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 ADRA1DP25100 572 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 PLCL1Q15111 1095 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 SHROOM1Q2M3G4 852 aaPredicted RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 AFTPHQ6ULP2 937 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 B4GALNT2Q8NHY0 566 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 CROTQ9UKG9 612 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 NDUFAF1Q9Y375 327 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 KPNA3O00505 521 aaPredicted RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 LCA5LO95447 670 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 FGF19O95750 216 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 CATP04040 527 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 ZNF23P17027 643 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 HNRNPH1P31943 449 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 TTPAP49638 278 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 AADACL2Q6P093 401 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 MTSS1LQ765P7 747 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 GPSM1Q86YR5 675 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 LRRN4CLQ8ND94 238 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 COMMD8Q9NX08 183 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 PCDHGC3Q9UN70 934 aa13.66□□□□□ -0.22
PTPRVP-205ENST00000641549 MAN1A2O60476 641 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 USP12O75317 370 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 CALCAP01258 141 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 RXRGP48443 463 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 DAB2P98082 770 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SETMARQ53H47 684 aaPredicted RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SLC24A5Q71RS6 500 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 EBNA1BP2Q99848 306 aaKnown RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SLC25A23Q9BV35 468 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SAE1Q9UBE0 346 aaPredicted RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 ADGRA3Q8IWK6 1321 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 RGS14O43566 566 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 CD86P42081 329 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 ATP13A4Q4VNC1 1196 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 FBXL19Q6PCT2 694 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 PIH1D1Q9NWS0 290 aaKnown RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 OPTCQ9UBM4 332 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 V9GYQ6 96 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 CNTNAP1P78357 1384 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SPEF2Q9C093 1822 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 TPST1O60507 370 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 ERVK-10P10266 1014 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 GOT1P17174 413 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 FMO4P31512 558 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 POTEHQ6S545 545 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 MIER2Q8N344 545 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 RASGEF1CQ8N431 466 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 CKAP2Q8WWK9 683 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SKA1Q96BD8 255 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 BTBD10Q9BSF8 475 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SYT17Q9BSW7 474 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 TTPALQ9BTX7 342 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 GNPTGQ9UJJ9 305 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 PNMA8BQ9ULN7 279 aaPredicted RBP13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
PTPRVP-205ENST00000641549 UNCXA6NJT0 531 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms