RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 I6L893 689 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-213ENST00000641272 FOXN3O00409 490 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-213ENST00000641272 LATO43561 262 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 PLRG1O43660 514 aaKnown RBP17.15■□□□□ 0.34
PHGDH-213ENST00000641272 ATP9BO43861 1147 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 RFPL3O75679 317 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 LDOC1O95751 146 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-213ENST00000641272 SRCP12931 536 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 RRM1P23921 792 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 PLK1P53350 603 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 CAMK2BQ13554 666 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 SMAD1Q15797 465 aaKnown RBP17.15■□□□□ 0.34
PHGDH-213ENST00000641272 MAN2A1Q16706 1144 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 C2CD6Q53TS8 623 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 SLC45A4Q5BKX6 768 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 FAM102AQ5T9C2 384 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-213ENST00000641272 LINGO4Q6UY18 593 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 TFAP2DQ7Z6R9 452 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 DSG4Q86SJ6 1040 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 PDZD3Q86UT5 571 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 SH2D3CQ8N5H7 860 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 TBCBQ99426 244 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 PSMB7Q99436 277 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 TKTL2Q9H0I9 626 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 CAAP1Q9H8G2 361 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 FZD3Q9NPG1 666 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 VPS51Q9UID3 782 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 OR51B4Q9Y5P0 310 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 FHOD1Q9Y613 1164 aa17.15■□□□□ 0.34
PHGDH-213ENST00000641272 CELSR3Q9NYQ7 3312 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 GTPBP10A4D1E9 387 aaKnown RBP17.14■□□□□ 0.33
PHGDH-213ENST00000641272 GOLGA8SH3BPF8 625 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 K7ERQ8 282 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 TLR4O00206 839 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
PHGDH-213ENST00000641272 CLDN11O75508 207 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 MT-CO1P00395 513 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 CTSLP07711 333 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-213ENST00000641272 PRLRP16471 622 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 NOS2P35228 1153 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 ARRB1P49407 418 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-213ENST00000641272 ACADVLP49748 655 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 OXCT1P55809 520 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 UBE2HP62256 183 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 DEUP1Q05D60 604 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 DPCR1Q3MIW9 517 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 FAM46CQ5VWP2 391 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 PRPF39Q86UA1 669 aaKnown RBP17.14■□□□□ 0.33
PHGDH-213ENST00000641272 GRIN3AQ8TCU5 1115 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 CRELD1Q96HD1 420 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 NPY6RQ99463 290 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 TNKS2Q9H2K2 1166 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.14■□□□□ 0.33
PHGDH-213ENST00000641272 MPP6Q9NZW5 540 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 ARHGAP20Q9P2F6 1191 aa17.14■□□□□ 0.33
PHGDH-213ENST00000641272 MYLKQ15746 1914 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 ATRXP46100 2492 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 RNF103O00237 685 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 KPNA3O00505 521 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-213ENST00000641272 SLC7A4O43246 635 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 GLDCP23378 1020 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 CDH4P55283 916 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 TAS2R38P59533 333 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 ATP11CQ8NB49 1132 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 CHST14Q8NCH0 376 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-213ENST00000641272 OR7D4Q8NG98 312 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 FAM131CQ96AQ9 280 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 ARRDC3Q96B67 414 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 NDST4Q9H3R1 872 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 ARHGEF38Q9NXL2 777 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 PPM1HQ9ULR3 514 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 STAP1Q9ULZ2 295 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 LAMA5O15230 3695 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 NBEAQ8NFP9 2946 aa17.13■□□□□ 0.33
PHGDH-213ENST00000641272 A0A0D9SEW6 157 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 MCF2LO15068 1137 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 ALOX15BO15296 676 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 SLC31A1O15431 190 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 YKT6O15498 198 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 SMAD6O43541 496 aaKnown RBP17.12■□□□□ 0.33
PHGDH-213ENST00000641272 RNGTTO60942 597 aaKnown RBP17.12■□□□□ 0.33
PHGDH-213ENST00000641272 ENDOD1O94919 500 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 FLT3P36888 993 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 DRAP1Q14919 205 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-213ENST00000641272 SETMARQ53H47 684 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-213ENST00000641272 MIIPQ5JXC2 388 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 BRMS1LQ5PSV4 323 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 PIP5KL1Q5T9C9 394 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 HES3Q5TGS1 186 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 C22orf39Q6P5X5 142 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 FAM71AQ8IYT1 594 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 MFSD2AQ8NA29 543 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 TMEM35BQ8NCS4 154 aa17.12■□□□□ 0.33
PHGDH-213ENST00000641272 LRIG1Q96JA1 1093 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms