RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 BANPQ8N9N5 519 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 SLC4A11Q8NBS3 891 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 TNIP2Q8NFZ5 429 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 SH3KBP1Q96B97 665 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 EXOSC4Q9NPD3 245 aaKnown RBP16.91■□□□□ 0.3
SCARB2-210ENST00000638567 ACSS2Q9NR19 701 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 SYNDIG1LA6NDD5 238 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 TCEA3O75764 348 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 LDLRP01130 860 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 TRAF2Q12933 501 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 AAGABQ6PD74 315 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 HPS6Q86YV9 775 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 HS6ST3Q8IZP7 471 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 NDNQ99608 321 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 ARFGEF2Q9Y6D5 1785 aa16.91■□□□□ 0.3
SCARB2-210ENST00000638567 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
SCARB2-210ENST00000638567 ZNF839A8K0R7 811 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 ATP5F1P24539 256 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 ARHGEF6Q15052 776 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 NFE2Q16621 373 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 AARS2Q5JTZ9 985 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 RNF145Q96MT1 663 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PRRG1O14668 218 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PIK3R1P27986 724 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 S100A5P33763 92 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 HUNKP57058 714 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 TBX4P57082 545 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 MSLNQ13421 630 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 CTXN3Q4LDR2 81 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 RFWD3Q6PCD5 774 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 DNAJC14Q6Y2X3 702 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PIWIL4Q7Z3Z4 852 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 ZC3H3Q8IXZ2 948 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 FNDC5Q8NAU1 212 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PGLYRP2Q96PD5 576 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PRDM16Q9HAZ2 1276 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 SSU72Q9NP77 194 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PRDM5Q9NQX1 630 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 SEPT3Q9UH03 358 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 CPA4Q9UI42 421 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 DSEQ9UL01 958 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 CBX4O00257 560 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 GRIA3P42263 894 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 NEK2P51955 445 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 TTLL9Q3SXZ7 439 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 VWA5B1Q5TIE3 1220 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 RP9Q8TA86 221 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 CDCA5Q96FF9 252 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 SPATA17Q96L03 361 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PAIP1Q9H074 479 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 CLPBQ9H078 707 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 GPR25O00155 361 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PDHXO00330 501 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
SCARB2-210ENST00000638567 JAG1P78504 1218 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 CERCAMQ5T4B2 595 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 PMF1Q6P1K2 205 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 TAF2Q6P1X5 1199 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 LRRC8DQ7L1W4 858 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 STK32CQ86UX6 486 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 C10orf82Q8WW14 230 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 ACOX2Q99424 681 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 SLC4A5Q9BY07 1137 aa16.9■□□□□ 0.3
SCARB2-210ENST00000638567 OR1E1P30953 314 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 KLF10Q13118 480 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 SYTL3Q4VX76 610 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 CENPLQ8N0S6 344 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-210ENST00000638567 SLC35B2Q8TB61 432 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 TAS2R13Q9NYV9 303 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 FAM50BQ9Y247 325 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 SLIT2O94813 1529 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
SCARB2-210ENST00000638567 KATNA1O75449 491 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 CYBBP04839 570 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 CCNB1P14635 433 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 AXLP30530 894 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 RPL5P46777 297 aaKnown RBP16.89■□□□□ 0.29
SCARB2-210ENST00000638567 MAPK10P53779 464 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 FOLH1Q04609 750 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 CDH18Q13634 790 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 MFSD10Q14728 455 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 PFKFB4Q16877 469 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 LIPMQ5VYY2 423 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 TRMT10BQ6PF06 316 aaKnown RBP16.89■□□□□ 0.29
SCARB2-210ENST00000638567 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 CDH19Q9H159 772 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 ZNF556Q9HAH1 456 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 TMEM161AQ9NX61 479 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 RAD54BQ9Y620 910 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 WASF2Q9Y6W5 498 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 SERPINH1P50454 418 aaKnown RBP16.89■□□□□ 0.29
SCARB2-210ENST00000638567 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.29
SCARB2-210ENST00000638567 KIAA2013Q8IYS2 634 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms