RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MIIPQ5JXC2 388 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 BRMS1LQ5PSV4 323 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 NAPEPLDQ6IQ20 393 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 Q6ZVU0 165 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 PRPF39Q86UA1 669 aaKnown RBP18.96■□□□□ 0.63
CLN6-220ENST00000637450 FAM114A1Q8IWE2 563 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 ZNF683Q8IZ20 524 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 SH2D3CQ8N5H7 860 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 MFSD2AQ8NA29 543 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 PIP4K2CQ8TBX8 421 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 PGAP3Q96FM1 320 aaPredicted RBP18.96■□□□□ 0.63
CLN6-220ENST00000637450 TUBGCP2Q9BSJ2 902 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 ERVMER34-1Q9H9K5 563 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 DKK4Q9UBT3 224 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 ITPR1Q14643 2758 aa18.96■□□□□ 0.63
CLN6-220ENST00000637450 APC2O95996 2303 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 TRABD2BA6NFA1 517 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 DRGXA6NNA5 263 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 C1QTNF3-AMACRE9PGA6 284 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 F9P00740 461 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 ZNF18P17022 549 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 NUDT1P36639 197 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 SCNN1AP37088 669 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 RXRGP48443 463 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 ARRB1P49407 418 aaPredicted RBP18.95■□□□□ 0.62
CLN6-220ENST00000637450 DRAP1Q14919 205 aaPredicted RBP18.95■□□□□ 0.62
CLN6-220ENST00000637450 ALFQ53S48 1182 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 CCDC157Q569K6 752 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 AGBL4Q5VU57 503 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 DHRS13Q6UX07 377 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 TRIM69Q86WT6 500 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 TMEM35BQ8NCS4 154 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 C1orf74Q96LT6 269 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 PSMB7Q99436 277 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 MUC3BQ9H195 1237 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 TMEM51Q9NW97 253 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 STAP1Q9ULZ2 295 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 HS3ST2Q9Y278 367 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 PCDHGA1Q9Y5H4 931 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 ACACAQ13085 2346 aa18.95■□□□□ 0.62
CLN6-220ENST00000637450 TMEM131Q92545 1883 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 GOLGA4Q13439 2230 aaKnown RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 ATRXP46100 2492 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 FAM149AA5PLN7 773 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 ENC1O14682 589 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 LDOC1O95751 146 aaPredicted RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 MT-CO1P00395 513 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 SRCP12931 536 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 PRKCSHP14314 528 aaPredicted RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 CYP11B1P15538 503 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 ERCC5P28715 1186 aaPredicted RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 EPHA8P29322 1005 aaPredicted RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 MAT2AP31153 395 aaKnown RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 SULT1E1P49888 294 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 KRT83P78385 493 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 KCNMA1Q12791 1236 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 BNIP3Q12983 259 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 POM121L1PQ3SYA9 428 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 KLHDC7AQ5VTJ3 777 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 IQCHQ86VS3 1027 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 SPATS2Q86XZ4 545 aaKnown RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 C18orf8Q96DM3 657 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 CNDP2Q96KP4 475 aaKnown RBP18.94■□□□□ 0.62
CLN6-220ENST00000637450 PDCL3Q9H2J4 239 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 CLSTN2Q9H4D0 955 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 DMTF1Q9Y222 760 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 SNX10Q9Y5X0 201 aa18.94■□□□□ 0.62
CLN6-220ENST00000637450 PTPRBP23467 1997 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 PLXNA2O75051 1894 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 CBX4O00257 560 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 SNAP91O60641 907 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 RHOCP08134 193 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 DEUP1Q05D60 604 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 OVGP1Q12889 678 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 RAPGEF1Q13905 1077 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 DPCR1Q3MIW9 517 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 SLC25A52Q3SY17 297 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 ACBD5Q5T8D3 534 aaPredicted RBP18.93■□□□□ 0.62
CLN6-220ENST00000637450 C19orf48Q6RUI8 117 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 SETD3Q86TU7 594 aaPredicted RBP18.93■□□□□ 0.62
CLN6-220ENST00000637450 TMPRSS12Q86WS5 348 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 ERICH1Q86X53 443 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 XYLT1Q86Y38 959 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 OXR1Q8N573 874 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 EID2Q8N6I1 236 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 PDCD7Q8N8D1 485 aaKnown RBP18.93■□□□□ 0.62
CLN6-220ENST00000637450 ATP11CQ8NB49 1132 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 OR2A12Q8NGT7 310 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 TBCBQ99426 244 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 C2orf49Q9BVC5 232 aaPredicted RBP18.93■□□□□ 0.62
CLN6-220ENST00000637450 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
CLN6-220ENST00000637450 VPS51Q9UID3 782 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 RAXQ9Y2V3 346 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 FARP1Q9Y4F1 1045 aaPredicted RBP18.93■□□□□ 0.62
CLN6-220ENST00000637450 PAXBP1Q9Y5B6 917 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 FHOD1Q9Y613 1164 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 KNTC1P50748 2209 aa18.93■□□□□ 0.62
CLN6-220ENST00000637450 K7ERQ8 282 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 BNIP3LO60238 219 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 MAGEC1O60732 1142 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms