RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 AHI1Q8N157 1196 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SLC35F6Q8N357 371 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SLC44A3Q8N4M1 653 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 DCAF4L2Q8NA75 395 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 KCTD6Q8NC69 237 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 FIBINQ8TAL6 211 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 RIN3Q8TB24 985 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 CASKIN2Q8WXE0 1202 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 HSPH1Q92598 858 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SHDQ96IW2 340 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 CSPG4P5Q96PW8 444 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 RNF157Q96PX1 679 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 KXD1Q9BQD3 176 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 FERMT1Q9BQL6 677 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 BBS2Q9BXC9 721 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TLR10Q9BXR5 811 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SMG9Q9H0W8 520 aaKnown RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 MAGEH1Q9H213 219 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 HPS4Q9NQG7 708 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 HOMER3Q9NSC5 361 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TRMT1Q9NXH9 659 aaKnown RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 KIAA1522Q9P206 1035 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 WNT16Q9UBV4 365 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 AMACRQ9UHK6 382 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 VANGL2Q9ULK5 521 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TTC7AQ9ULT0 858 aaPredicted RBP6.9□□□□□ -1.3
UPF3B-205ENST00000636792 TFR2Q9UP52 801 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 WNT6Q9Y6F9 365 aa6.9□□□□□ -1.3
UPF3B-205ENST00000636792 SZT2Q5T011 3432 aa6.9□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 A0A0U1RQJ8 604 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ARHGAP42A6NI28 874 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 C3orf70A6NLC5 250 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 USP27XA6NNY8 438 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 HACD1B0YJ81 288 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 NEDD8-MDP1E9PL57 170 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 H0Y626 953 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 APOL1O14791 398 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 PPP1R12AO14974 1030 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 DAPK3O43293 454 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 TIMM44O43615 452 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 CREB3O43889 395 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF500O60304 480 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 FTCDO95954 541 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 TYRP14679 529 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ERCC2P18074 760 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 OR1E1P30953 314 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 DGKGP49619 791 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 GNG11P61952 73 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF177Q13360 481 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 XRCC4Q13426 336 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ANKRD20A8PQ5CZ79 823 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 PPP6R3Q5H9R7 873 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 KCNT1Q5JUK3 1230 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 TIGD7Q6NT04 549 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 RHBDF2Q6PJF5 856 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ANKS1BQ7Z6G8 1248 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 KIAA0907Q7Z7F0 614 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 CCDC50Q8IVM0 306 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 GJD3Q8N144 294 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 SYNPOQ8N3V7 929 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 RASGEF1CQ8N431 466 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 DDI1Q8WTU0 396 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 UCMAQ8WVF2 138 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ATRIPQ8WXE1 791 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF592Q92610 1267 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ALG3Q92685 438 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 HAUS1Q96CS2 278 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 HDAC11Q96DB2 347 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 RSPRY1Q96DX4 576 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF599Q96NL3 588 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 NELL2Q99435 816 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 C2orf49Q9BVC5 232 aaPredicted RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 CALN1Q9BXU9 219 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 MAK16Q9BXY0 300 aaKnown RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 OSBPL6Q9BZF3 934 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ANLNQ9NQW6 1124 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ARHGEF4Q9NR80 690 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF212Q9UDV6 495 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 XPO7Q9UIA9 1087 aaKnown RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 SNX12Q9UMY4 172 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 MRPS17Q9Y2R5 130 aaKnown RBP6.89□□□□□ -1.31
UPF3B-205ENST00000636792 CKAP5Q14008 2032 aa6.89□□□□□ -1.31
UPF3B-205ENST00000636792 NUP205Q92621 2012 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TCF20Q9UGU0 1960 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 A0A0A0MRY4 1105 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GOLGA6L10A0A0M3HER8 536 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 FAM170AA1A519 330 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 CFAP69A5D8W1 941 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 PGRMC1O00264 195 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 KCNK3O14649 394 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TRDMT1O14717 391 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RAMP2O60895 175 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TBL1XO60907 577 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms