RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SH2D3CQ8N5H7 860 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 C12orf50Q8NA57 414 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 TOE1Q96GM8 510 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 CCDC114Q96M63 670 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 PSMB7Q99436 277 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 SNRNP25Q9BV90 132 aaKnown RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 RSPH9Q9H1X1 276 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 NHEJ1Q9H9Q4 299 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 PARD6AQ9NPB6 346 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 HPCAL4Q9UM19 191 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 DOCK4Q8N1I0 1966 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 RALGAPA1Q6GYQ0 2036 aa14.31□□□□□ -0.12
PCDHGC3-208ENST00000622836 BCLAF3A2AJT9 711 aaKnown RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 MEI4A8MW99 385 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 MYO1FO00160 1098 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 EEF2KO00418 725 aaKnown RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 FGF10O15520 208 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ATP9BO43861 1147 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 LRCH4O75427 683 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 IL1BP01584 269 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 CYP1A2P05177 515 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 H2AFZP0C0S5 128 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 VAV1P15498 845 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 GLDCP23378 1020 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF75DP51815 510 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 LMNB2Q03252 620 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF33AQ06730 810 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 TBX2Q13207 712 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ELAVL3Q14576 367 aaKnown RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 POLD3Q15054 466 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 CSRP2Q16527 193 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 AASDHQ4L235 1098 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 PPP6R3Q5H9R7 873 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 SPDYCQ5MJ68 293 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 DAB2IPQ5VWQ8 1189 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 Q6ZVU0 165 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 H2AFVQ71UI9 128 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 NLRP14Q86W24 1093 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ARFGAP1Q8N6T3 406 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 RTL3Q8N8U3 475 aaKnown RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF564Q8TBZ8 553 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 OR8D1Q8WZ84 308 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ARHGEF26Q96DR7 871 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 BTBD6Q96KE9 485 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 HSPA12BQ96MM6 686 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 PEBP4Q96S96 227 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 CHP1Q99653 195 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 GPR174Q9BXC1 333 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 VPS45Q9NRW7 570 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 NDFIP2Q9NV92 336 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 WSB2Q9NYS7 404 aaPredicted RBP14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZNF212Q9UDV6 495 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 SCML1Q9UN30 329 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 HS3ST2Q9Y278 367 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 CFAP54Q96N23 3096 aa14.3□□□□□ -0.12
PCDHGC3-208ENST00000622836 PLXND1Q9Y4D7 1925 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 GON4LQ3T8J9 2241 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 FOXD2O60548 495 aaPredicted RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 RNASEH2AO75792 299 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 MT-CO1P00395 513 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 SRCP12931 536 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 HTR7P34969 479 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 PCK1P35558 622 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 ACVRL1P37023 503 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 DPP6P42658 865 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 RECQLP46063 649 aaPredicted RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 DNA2P51530 1060 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 CLCN6P51797 869 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 CST6Q15828 149 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 SMTNL2Q2TAL5 461 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 SYCP2LQ5T4T6 812 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 ARTNQ5T4W7 220 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 PRR23CQ6ZRP0 262 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 RGL4Q8IZJ4 473 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 FRS2Q8WU20 508 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 HSPH1Q92598 858 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 FOXJ1Q92949 421 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 ARHGEF2Q92974 986 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 MRFAP1L1Q96HT8 127 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 OMDQ99983 421 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 PACSIN1Q9BY11 444 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 BTBD1Q9H0C5 482 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 MAGEH1Q9H213 219 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 PABPC3Q9H361 631 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 SMOC1Q9H4F8 434 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 ZWILCHQ9H900 591 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 FBXL12Q9NXK8 326 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 DONSONQ9NYP3 566 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 NEU3Q9UQ49 428 aa14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 ATXN2Q99700 1313 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-208ENST00000622836 A0A1W2PP55 124 aa14.28□□□□□ -0.12
PCDHGC3-208ENST00000622836 FAM47DPA6NHR8 397 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms