RNA–Protein interactions for RNA: ENST00000621582.1

SRGAP2B-206, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 5

Gene SRGAP2B, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-206ENST00000621582 A0A0D9SEW6 157 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 CCDC163A0A0D9SF12 145 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ILVBLA1L0T0 632 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ANTXRLA6NF34 631 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SOWAHDA6NJG2 315 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ESPNB1AK53 854 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FAM72CH0Y354 149 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 H3BRJ5 948 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 I6L893 689 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 CBX4O00257 560 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FGF10O15520 208 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SPOPO43791 374 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 BNIP3LO60238 219 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 RAMP2O60895 175 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ADAM23O75077 832 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ZNF217O75362 1048 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 LRCH4O75427 683 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 RPP40O75818 363 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PROSCO94903 275 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 NDUFA10O95299 355 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PAPSS2O95340 614 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 DNTTP04053 509 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PTMAP06454 111 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SRPRAP08240 638 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 KRT7P08729 469 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 RARAP10276 462 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 HLA-EP13747 358 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 TNNT1P13805 278 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 HOXA6P31267 233 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 HTR7P34969 479 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 GJC1P36383 396 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 IL12RB1P42701 662 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SLC1A1P43005 524 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 RECQLP46063 649 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 MAPKAPK2P49137 400 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 MRE11P49959 708 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 DNA2P51530 1060 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PLK1P53350 603 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 CDH6P55285 790 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 NRG1Q02297 640 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 GNA12Q03113 381 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 DHX9Q08211 1270 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SLC20A2Q08357 652 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SCAPQ12770 1279 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 KIF5AQ12840 1032 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SFSWAPQ12872 951 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SIM2Q14190 667 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 POLD3Q15054 466 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 IFI16Q16666 785 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SMTNL2Q2TAL5 461 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FUT11Q495W5 492 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FAM72AQ5TYM5 149 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 TMEM215Q68D42 235 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FAM72DQ6L9T8 149 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 CXorf57Q6NSI4 855 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 KIAA1324Q6UXG2 1013 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ZNF783Q6ZMS7 281 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 RFX8Q6ZV50 586 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 KIAA0907Q7Z7F0 614 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 KIAA1328Q86T90 577 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 WDR5BQ86VZ2 330 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FAM72BQ86X60 149 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 TMPRSS6Q8IU80 811 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 MAML2Q8IZL2 1156 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PYROXD2Q8N2H3 581 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 NIPA2Q8N8Q9 360 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 WFDC5Q8TCV5 224 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 GANCQ8TET4 914 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PRCCQ92733 491 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ARHGEF26Q96DR7 871 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SIPA1Q96FS4 1042 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 P2RY11Q96G91 374 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SPACA7Q96KW9 195 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 CCDC114Q96M63 670 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SNRNP25Q9BV90 132 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 MAGEB5Q9BZ81 275 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 TPSD1Q9BZJ3 242 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 MAGEH1Q9H213 219 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SEMA4AQ9H3S1 761 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PRDM16Q9HAZ2 1276 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 OSGEPQ9NPF4 335 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 PRMT8Q9NR22 394 aaPredicted RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 FAM86C1Q9NVL1 165 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 TMEM248Q9NWD8 314 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 GPATCH2LQ9NWQ4 482 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 C2orf42Q9NWW7 574 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 EBF1Q9UH73 591 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 SLCO3A1Q9UIG8 710 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 INTS6Q9UL03 887 aaKnown RBP4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 ERVW-1Q9UQF0 538 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 INVSQ9Y283 1065 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 NCKAP1Q9Y2A7 1128 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 R4GN57 208 aa4.82□□□□□ -1.64
SRGAP2B-206ENST00000621582 TRIOO75962 3097 aa4.81□□□□□ -1.64
SRGAP2B-206ENST00000621582 TECTAO75443 2155 aa4.81□□□□□ -1.64
SRGAP2B-206ENST00000621582 EDDM13A0A1B0GTR0 161 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms