RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 CTSAP10619 480 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 RPS15P62841 145 aaKnown RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 TRADDQ15628 312 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 PAGE2BQ5JRK9 111 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 CHST15Q7LFX5 561 aaPredicted RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 NLRP9Q7RTR0 991 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 CABS1Q96KC9 395 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 SNX27Q96L92 541 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 WDR6Q9NNW5 1121 aaKnown RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 ZDHHC7Q9NXF8 308 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 O00370 1275 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 PSMA3P25788 255 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 CHI3L1P36222 383 aaPredicted RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 GRIA2P42262 883 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 SESN3P58005 492 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 RPP38P78345 283 aaKnown RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 MBTD1Q05BQ5 628 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 HIF1AQ16665 826 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 C2CD6Q53TS8 623 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 KCTD10Q9H3F6 313 aa11.11□□□□□ -0.63
POLR2A-209ENST00000617998 SUCOQ9UBS9 1254 aaKnown RBP11.11□□□□□ -0.63
POLR2A-209ENST00000617998 MMEP08473 750 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 NEK3P51956 506 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 NCSTNQ92542 709 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 FAM167BQ9BTA0 163 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 ZCWPW1Q9H0M4 648 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 HPS4Q9NQG7 708 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 EVLQ9UI08 416 aaPredicted RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 HCN2Q9UL51 889 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 SNX6Q9UNH7 406 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 POLR1DQ9Y2S0 133 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 A0A1B0GVM2 712 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 TCAF2A6NFQ2 919 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 GUCA1CO95843 209 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 EPCAMP16422 314 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 ECT2LQ008S8 904 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 GNA13Q14344 377 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 KBTBD6Q86V97 674 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 CYB5D2Q8WUJ1 264 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 SUSD3Q96L08 255 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 RPL10LQ96L21 214 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 CDX2Q99626 313 aaPredicted RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 TTLL2Q9BWV7 592 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 H3BMM5 538 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 FSCBQ5H9T9 825 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 ZCCHC8Q6NZY4 707 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 USP7Q93009 1102 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 MYO19Q96H55 970 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 ACTR8Q9H981 624 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 OGDHLQ9ULD0 1010 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 CDK14O94921 469 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 CARSP49589 748 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 NAA25Q14CX7 972 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 MORF4L2Q15014 288 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 BRMS1LQ5PSV4 323 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 C6orf10Q5SRN2 563 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 ATAD3BQ5T9A4 648 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 STK40Q8N2I9 435 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 FAM71DQ8N9W8 422 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 PPWD1Q96BP3 646 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 INTS10Q9NVR2 710 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 COL20A1Q9P218 1284 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 MSI1O43347 362 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 TMEM126BQ8IUX1 230 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 SLC44A2Q8IWA5 706 aaPredicted RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 LRRC40Q9H9A6 602 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 TRPC4Q9UBN4 977 aa11.1□□□□□ -0.63
POLR2A-209ENST00000617998 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
POLR2A-209ENST00000617998 OR6A2O95222 327 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 MATKP42679 507 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 DLG2Q15700 870 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CNGA2Q16280 664 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 ZDHHC20Q5W0Z9 365 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CCDC185Q8N715 623 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 SLC35G2Q8TBE7 412 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 DENND1AQ8TEH3 1009 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 OSBPL8Q9BZF1 889 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 WDR26Q9H7D7 661 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 E2F6O75461 281 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 TYRP14679 529 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 AVPR1BP47901 424 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 LILRA4P59901 499 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 ARSJQ5FYB0 599 aaPredicted RBP11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 HERC2P3Q9BVR0 1158 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 SRMSQ9H3Y6 488 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 ELOVL6Q9H5J4 265 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 CYP4F12Q9HCS2 524 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 HEBP2Q9Y5Z4 205 aa11.09□□□□□ -0.63
POLR2A-209ENST00000617998 NFAT5O94916 1531 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms