RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SMUG1Q53HV7 270 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
FOXN3-219ENST00000615335 RNASEH2BQ5TBB1 312 aaKnown RBP13.35□□□□□ -0.27
FOXN3-219ENST00000615335 CAPN12Q6ZSI9 719 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 LRRC6Q86X45 466 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 TMEM35BQ8NCS4 154 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 UBA3Q8TBC4 463 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 DENND1AQ8TEH3 1009 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 CCT7Q99832 543 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 TRPC7Q9HCX4 862 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 DKK3Q9UBP4 350 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PCDHB12Q9Y5F1 795 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 TCRBV5S1A1TA0A578 114 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 MYBPHLA2RUH7 354 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 SGK1O00141 431 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 BUD23O43709 281 aaKnown RBP13.35□□□□□ -0.27
FOXN3-219ENST00000615335 DNAJC6O75061 913 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 OAZ2O95190 189 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 FGFR3P22607 806 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 ADORA2BP29275 332 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 OGDHQ02218 1023 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 TAP1Q03518 808 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 STILQ15468 1287 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 OASLQ15646 514 aaKnown RBP13.35□□□□□ -0.27
FOXN3-219ENST00000615335 CCDC142Q17RM4 750 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 GOLGA7BQ2TAP0 167 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 DENND1BQ6P3S1 775 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 LCLAT1Q6UWP7 414 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 TAS1R1Q7RTX1 841 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 SLC2A14Q8TDB8 520 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
FOXN3-219ENST00000615335 BIRC8Q96P09 236 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 BTBD9Q96Q07 612 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 OSBPL10Q9BXB5 764 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PPCSQ9HAB8 311 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 PCDH9Q9HC56 1237 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 SPG21Q9NZD8 308 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 SHOC2Q9UQ13 582 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 NUMBLQ9Y6R0 609 aa13.35□□□□□ -0.27
FOXN3-219ENST00000615335 LCHNA4D1U4 455 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ITGAVP06756 1048 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 VCLP18206 1134 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 RABGGTBP53611 331 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 IRX4P78413 519 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TSPY1Q01534 308 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 PFKPQ01813 784 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 PDIA2Q13087 525 aaKnown RBP13.34□□□□□ -0.27
FOXN3-219ENST00000615335 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TXNRD3NBQ6F5E7 133 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 KIAA1841Q6NSI8 718 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 UGT2A3Q6UWM9 527 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ERI1Q8IV48 349 aaKnown RBP13.34□□□□□ -0.27
FOXN3-219ENST00000615335 SLC39A11Q8N1S5 342 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 PYROXD1Q8WU10 500 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
FOXN3-219ENST00000615335 SRPK1Q96SB4 655 aaKnown RBP13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TMEM121Q9BTD3 319 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TTPALQ9BTX7 342 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 IFNB1P01574 187 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TFAP2AP05549 437 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ESRRAP11474 423 aaPredicted RBP13.34□□□□□ -0.27
FOXN3-219ENST00000615335 CDKN2BP42772 138 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ACTR3P61158 418 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 NAA20P61599 178 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 MMEL1Q495T6 779 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 INTS6LQ5JSJ4 861 aaKnown RBP13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ARHGAP17Q68EM7 881 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 C4orf33Q8N1A6 199 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 WDTC1Q8N5D0 677 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 PCED1BQ96HM7 432 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TMEM209Q96SK2 561 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ZNF518BQ9C0D4 1074 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 LHX5Q9H2C1 402 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 ARL8BQ9NVJ2 186 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 TAS2R1Q9NYW7 299 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 SLC24A2Q9UI40 661 aa13.34□□□□□ -0.27
FOXN3-219ENST00000615335 KIAA1671Q9BY89 1806 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 GRXCR1A8MXD5 290 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 CLDN5O00501 218 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 KDM1AO60341 852 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 CAPN15O75808 1086 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 PGM3O95394 542 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 COL6A2P12110 1019 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 CA4P22748 312 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 AMPD1P23109 780 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 PPM1AP35813 382 aa13.33□□□□□ -0.27
FOXN3-219ENST00000615335 NADK2Q4G0N4 442 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms