RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SAR1AQ9NR31 198 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 HAO1Q9UJM8 370 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 TLR6Q9Y2C9 796 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 STK38LQ9Y2H1 464 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 COL4A6Q14031 1691 aa19.53■□□□□ 0.72
MMP28-204ENST00000615136 A8MUI8 341 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 WFS1O76024 890 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 AP2A1O95782 977 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 HAPLN1P10915 354 aaPredicted RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 EZRP15311 586 aaKnown RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 ATF6P18850 670 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 BGNP21810 368 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 MLLT6P55198 1093 aaPredicted RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 PSMD5Q16401 504 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 CTC1Q2NKJ3 1217 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 TAF1BQ53T94 588 aaPredicted RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 CLNKQ7Z7G1 428 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 MIB1Q86YT6 1006 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 TMEM175Q9BSA9 504 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 BEGAINQ9BUH8 593 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 MRPL9Q9BYD2 267 aaKnown RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 IQCGQ9H095 443 aaKnown RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 BRD8Q9H0E9 1235 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.52■□□□□ 0.72
MMP28-204ENST00000615136 VANGL2Q9ULK5 521 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 PLLPQ9Y342 182 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 HOXA2O43364 376 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 SERPINB9P50453 376 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 TBX4P57082 545 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 E2F5Q15329 346 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 ZNF683Q8IZ20 524 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 LRRC43Q8N309 656 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 LNPEPQ9UIQ6 1025 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 DCTN4Q9UJW0 460 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 MAGED2Q9UNF1 606 aaPredicted RBP19.52■□□□□ 0.72
MMP28-204ENST00000615136 NUMBLQ9Y6R0 609 aa19.52■□□□□ 0.72
MMP28-204ENST00000615136 ARHGAP42A6NI28 874 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 MAFKO60675 156 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 HNRNPCL1O60812 293 aaKnown RBP19.51■□□□□ 0.71
MMP28-204ENST00000615136 EFEMP2O95967 443 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 HMBSP08397 361 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 RASSF2P50749 326 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 CRYMQ14894 314 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 SPPL2BQ8TCT7 592 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 FCRL3Q96P31 734 aaPredicted RBP19.51■□□□□ 0.71
MMP28-204ENST00000615136 NOL6Q9H6R4 1146 aaKnown RBP19.51■□□□□ 0.71
MMP28-204ENST00000615136 CWH43Q9H720 699 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 CCSER2Q9H7U1 834 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 KCNK13Q9HB14 408 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 DNAJC6O75061 913 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 ALDH1A2O94788 518 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 CBX6O95503 412 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 DLDP09622 509 aaKnown RBP19.51■□□□□ 0.71
MMP28-204ENST00000615136 MS4A13Q5J8X5 152 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 CCDC91Q7Z6B0 441 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 MTDHQ86UE4 582 aaKnown RBP19.51■□□□□ 0.71
MMP28-204ENST00000615136 TRIM42Q8IWZ5 723 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 FBXO22Q8NEZ5 403 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 SPATA22Q8NHS9 363 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 TACO1Q9BSH4 297 aaKnown RBP19.51■□□□□ 0.71
MMP28-204ENST00000615136 EBF2Q9HAK2 575 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 TRHDEQ9UKU6 1024 aa19.51■□□□□ 0.71
MMP28-204ENST00000615136 FGF10O15520 208 aaPredicted RBP19.5■□□□□ 0.71
MMP28-204ENST00000615136 CNTN5O94779 1100 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 F7P08709 466 aaPredicted RBP19.5■□□□□ 0.71
MMP28-204ENST00000615136 CCND1P24385 295 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 CNTFP26441 200 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 ALFQ53S48 1182 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 CERCAMQ5T4B2 595 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 ZNF449Q6P9G9 518 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 TIFABQ6ZNK6 161 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 ANKS3Q6ZW76 656 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 MARK2Q7KZI7 788 aaKnown RBP19.5■□□□□ 0.71
MMP28-204ENST00000615136 TFAP2DQ7Z6R9 452 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 ATPAF2Q8N5M1 289 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 RTL3Q8N8U3 475 aaKnown RBP19.5■□□□□ 0.71
MMP28-204ENST00000615136 SKA1Q96BD8 255 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 MYEOVQ96EZ4 313 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 CATSPERBQ9H7T0 1116 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 MTO1Q9Y2Z2 717 aaKnown RBP19.5■□□□□ 0.71
MMP28-204ENST00000615136 PSAT1Q9Y617 370 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 BPTFQ12830 3046 aa19.5■□□□□ 0.71
MMP28-204ENST00000615136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.49■□□□□ 0.71
MMP28-204ENST00000615136 A0A0G2JND7 137 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 MTSS1O43312 755 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 PGAM1P18669 254 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 CCNCP24863 283 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 ARFIP2P53365 341 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 NIPAL4Q0D2K0 466 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 ELAVL2Q12926 359 aaKnown RBP19.49■□□□□ 0.71
MMP28-204ENST00000615136 C10orf120Q5SQS8 335 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 MROH9Q5TGP6 573 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 AFMIDQ63HM1 303 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 ARHGAP18Q8N392 663 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 SPATA17Q96L03 361 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 C7orf26Q96N11 449 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 TSGA13Q96PP4 275 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 CASS4Q9NQ75 786 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 CLIC5Q9NZA1 410 aa19.49■□□□□ 0.71
MMP28-204ENST00000615136 SIRPGQ9P1W8 387 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms